Gene Amir_3012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3012 
Symbol 
ID8327202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp3480917 
End bp3481576 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content72% 
IMG OID644943538 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100778 
Protein GI256377118 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.367148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGCGG AGCCCGACCG ACGACCGCGC GCCGACGCCG CGCGCAACAT CGAGCACATC 
CTGTGCGCCG CACGCGAGGT CTTCGCCCGC GTGGGCCCGG ACGCTCCCCT GGACGAGGTG 
GCCAAGCACG CGGGCCTGGG CGTCCGCACC CTGCACCGCC ACTTCCCGCG CAAGGAAGAC 
CTGGTCAAAG CAACCCTGGA CCGCGCCCTC ACCCAGGACT TCGCCCACGC CATCACCAAG 
GCGAACTCCA CCCCGAACCC GCTCCAGGCC CTCACCTCGC TGATCGAGGA AACCCTCACC 
CTGGTGGACC GCGAACGCCC CACCCTGGCA GCCGCGAACA ACCCCAGCGC CCTGACCGCG 
GCCATCGCCG AACCCCTGCT CGACACCCTG ACCGAGCTGA CCGGAAAAGC CCAACGCGCA 
GCCCTGATCC GCCCGGACCT CACCCCGTAC GACGTGCACC GCCTGCTGGG GATGCTGACC 
AGCGTCCTGT GGGGCATGGT GCCAGGCGAC CAGGGCTGGC GCAGGTACGT GGTCCTGCTC 
CTGGACGCCC TGTCCCCAAC CGCAACCACC CCACTCCCAC CCGCAAGCCC GCTCCACCCC 
GCGGGCGCGG GAGCGGAGTG CACCCCCGCA TGGCGAACCA GCGCGTCCGA AACCCCGTGA
 
Protein sequence
MKAEPDRRPR ADAARNIEHI LCAAREVFAR VGPDAPLDEV AKHAGLGVRT LHRHFPRKED 
LVKATLDRAL TQDFAHAITK ANSTPNPLQA LTSLIEETLT LVDRERPTLA AANNPSALTA 
AIAEPLLDTL TELTGKAQRA ALIRPDLTPY DVHRLLGMLT SVLWGMVPGD QGWRRYVVLL 
LDALSPTATT PLPPASPLHP AGAGAECTPA WRTSASETP