| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3009 |
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| Symbol | |
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| ID | 8327199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3477602 |
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| End bp | 3479269 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644943535 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003100775 |
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| Protein GI | 256377115 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCGC AGTGGTGGAA GTCGGCGGTC GTGTACCAGG TGTACCCGCG CAGCTTCGCC
GACTCCGGCG GCGACGGGAT CGGGGACCTC GCGGGCATCA CCTCGCGGCT CGACCACCTG
GCCGCGCTCG GCGTCGACGT CGTCTGGCTC TCGCCGGTCT ACCGCTCCCC GCACGCCGAC
AACGGCTACG ACATCTCCGA CTACCGGGAC ATCGACCCGG TGTTCGGCAC CCTCGCCGAC
TTCGACCACC TGATCGGCGA GGTGCACGCC CGAGGCATGA AGCTCGTCAT GGACCTCGTG
GTCAACCACA CCTCCGACGA GCACCCGTGG TTCGCCGAGT CCCGCTCCGG CAAGGACAAC
CCCAAGCGCG ACTGGTACGT CTGGCGCCCG CCGAGGGACG GCCACGAGCT CGGCGAGCCG
GGCGCGGAGC CGAACAACTG GTCCTCGTTC TTCTCCGGCC CCGCCTGGCA GGCCGACCCG
GCCACCGGCG AGTACTACCT GCACCTGTTC GACCGCAAGC AGCCCGACCT CAACTGGGAC
AACCCCGAGG TGCGCGAAGC GGTCTACGAC ATGATGCGCT GGTGGCTCGA CCGGGGCGTC
GACGGCTTCC GCATGGACGT CATCAACCTC ATCGCCAAGC ACCCGGACCT GCCCGACGCG
CCCGCCGAAC CGGGCGCCCT CGGCGACGGC TTCCCCTACT ACGGCACGCT CCCGCGCGTC
CACGAGCACC TGCGCGAGAT GCGCCGCGAG GTGTTCGACG GCCGGGAGGG CGGGTTCCTG
ACCGTCGGCG AGATGCCCGG CGTGACCACG CAGCAGGCCC GCGAGTTCAC CGACCCGGCG
AACCACGAGA TCGACATGGT GTTCCAGTTC GAGCACGTCT CGCTCGACCA CGGCCCCGGC
GGCAAGTTCG ACCCGGTGCC GCTGGACCTG CGCGCGTTCA AGGCGTCCAT GGCTGCCTGG
CAGGGCGAGC TGGCCGAGGT CGGCTGGAAC AGCCTCTACC TGGGCAACCA CGACCAGCCC
AGGGCGGTGT CGAGGTTCGG CGACGACGAC CGGTGGTGGC GCGAGTCGGC GACCGCGCTC
GCGACCGTCC TGCACCTGCA CCGGGGCACG CCGTACGTGT ACCAGGGCGA GGAGCTGGGC
ATGACGAACT CGCCGTTCGT CGACGCGGAG GCCCTGCGGG ACGTCGAGTC CCTCAACCAC
CTGCGCCAGG CCCTCGCCGC CGGGCAGGAC GCGGACGCGG TGTGGCGCGG GGTGCGGGCG
ATGGGGCGGG ACAACGCGCG CACGCCCGTG CAGTGGGACG GCGGGACGAA CGGCGGGTTC
ACCACCGGCA CGCCGTGGAT CGCGGTCAAC CCGAACAGCT CCTGGCTCAA CGCCGAGGCG
CAGCGGGCCG ACCAGGCGTC GGTGTTCCAC CACTACCGCA GGCTGATCGA GCTCAGGCAC
ACGCTGCCGG TGGTGGTGGA GGGGACGTTC CGGATGCTGC TGCCGGAACA CCCGGACGTG
TACGCGTACG AGCGGGTGCT GGGGGAGGAG CGGCTGCTGG TGGTGGCGAA CCTGAGCGGG
ACCGAGCAGC CGGTGGACCT GGACCTGGGC GGCGAGGTGC TGCTGGCCAA CGTGGAACCG
GTCGGGCAGG TGCTCGCGCC CTGGCAGGCG GTGGTGCTGC GGGCCTAG
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| Protein sequence | MDAQWWKSAV VYQVYPRSFA DSGGDGIGDL AGITSRLDHL AALGVDVVWL SPVYRSPHAD
NGYDISDYRD IDPVFGTLAD FDHLIGEVHA RGMKLVMDLV VNHTSDEHPW FAESRSGKDN
PKRDWYVWRP PRDGHELGEP GAEPNNWSSF FSGPAWQADP ATGEYYLHLF DRKQPDLNWD
NPEVREAVYD MMRWWLDRGV DGFRMDVINL IAKHPDLPDA PAEPGALGDG FPYYGTLPRV
HEHLREMRRE VFDGREGGFL TVGEMPGVTT QQAREFTDPA NHEIDMVFQF EHVSLDHGPG
GKFDPVPLDL RAFKASMAAW QGELAEVGWN SLYLGNHDQP RAVSRFGDDD RWWRESATAL
ATVLHLHRGT PYVYQGEELG MTNSPFVDAE ALRDVESLNH LRQALAAGQD ADAVWRGVRA
MGRDNARTPV QWDGGTNGGF TTGTPWIAVN PNSSWLNAEA QRADQASVFH HYRRLIELRH
TLPVVVEGTF RMLLPEHPDV YAYERVLGEE RLLVVANLSG TEQPVDLDLG GEVLLANVEP
VGQVLAPWQA VVLRA
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