Gene Amir_2979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2979 
Symbol 
ID8327168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3444924 
End bp3446189 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content71% 
IMG OID644943504 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003100745 
Protein GI256377085 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0876079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCAGA CCACCGCAGG CACACCGTCG CCCTCCGCGT CGGAGCCGTC CGGACCCCCG 
GTCCCCGCGC GTCTCGGCAA GCTCGGCCCC CTGCTCTTCC AGGCGCACTT CGGCTGGGTG
GTCGCCCTCG GCGTCTCCAC CACGCTCATC CCCGCGCTCA TGGAGCAGGT CGACCCCGAG
GCCAAGGTCG CCCTCTACGG CGTGCTCACC GCCGTCGGCG CGGCGGCCGG TCTGGTCGCG
AACATCCTGT TCGGCTCGCT GTCCGACCGC ACCCGCTCCC GGTTCGGCAA GCGCAACGGC
TGGATCGCGG TGGGCGGCCT GGTCTCCGCC GCGTCCCTGA GCGCGATGTC CACCACCAGC
TCGTTCGGGC TGCTGATCGT GCTGTACATC GGCTACCAGA TCGGCCTGAA CGCCCTGCTC
GCCCCGCTCT ACGCCGTGCT GCCCGACCGG GTGCCCACCG AGCGCCGCGG CCTGGCGTCG
GCGGTCATCG GCCTCGGGAT GCTGCTCGCG CAGAGCGCGG GCGCGGTCAT CGGCGCGGCG
TTCCTGGACG AGATCCGCAC CGGCATGGCG ATCATGCCGT GGGCGATCGC GGTCACCGCG
CTGGTCTTCG CCGTCTTCGC CAAGGACCGC CCCAACCTCG ACGAGCCGCG CGAGGCGTTC
TCCCTGGTCG AGCTGGCCCG CACCTTCAAG GTCCCGGCCG ACCGCGACTA CCTGCTCGCC
CTGTTCGGCA GGCTCACCCT GCTGCTGGCC TACTTCTCCG CCACCCTCTA CCAGCTGTTC
ATCCTGCAGG ACTACATCAA GCTCGACGCG GCGGGCGTGG CGGGCACCGT CGCGCTCGCG
GGTGTGATCA TGGCAGTGGC CTCCGGGATC GGCACGCTGA TCTCCGGCCC GCTCTCCGAC
CGCATCGGCA GGCGCAAGCC GCTGATCATC CTGGCCTCGC TGATCATCGC GGGCGCGTTC
GTCCCGCTGG CGCTGGTGCC CACGCGCGGC ATGTTCCTGA CCTTCATCGC GCTCGGCGGC
TTCGCGTACG GCATCTACAT CGCGGTCGAC CAGGCGCTGC TCAGCGACGT GCTGCCCAGC
GACGCCAACC ACGGCAAGGA CATGGGCATC CTGAACGTGG CCAACACCGC GCCGCAGTTC
CTCGCCCCCG GCGTCGCCGG GCTCGCCCTC GCCTCCGGCA TCGGCTACAG CGGCCTGTTC
CTCGTCTCCG CCGGGCTCGC GGTGTTCTCG GCGTTCCTGA TCACGGGCAT CAGGCGCGTG
CGCTGA
 
Protein sequence
MSQTTAGTPS PSASEPSGPP VPARLGKLGP LLFQAHFGWV VALGVSTTLI PALMEQVDPE 
AKVALYGVLT AVGAAAGLVA NILFGSLSDR TRSRFGKRNG WIAVGGLVSA ASLSAMSTTS
SFGLLIVLYI GYQIGLNALL APLYAVLPDR VPTERRGLAS AVIGLGMLLA QSAGAVIGAA
FLDEIRTGMA IMPWAIAVTA LVFAVFAKDR PNLDEPREAF SLVELARTFK VPADRDYLLA
LFGRLTLLLA YFSATLYQLF ILQDYIKLDA AGVAGTVALA GVIMAVASGI GTLISGPLSD
RIGRRKPLII LASLIIAGAF VPLALVPTRG MFLTFIALGG FAYGIYIAVD QALLSDVLPS
DANHGKDMGI LNVANTAPQF LAPGVAGLAL ASGIGYSGLF LVSAGLAVFS AFLITGIRRV
R