Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2979 |
Symbol | |
ID | 8327168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3444924 |
End bp | 3446189 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644943504 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003100745 |
Protein GI | 256377085 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0876079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCCAGA CCACCGCAGG CACACCGTCG CCCTCCGCGT CGGAGCCGTC CGGACCCCCG GTCCCCGCGC GTCTCGGCAA GCTCGGCCCC CTGCTCTTCC AGGCGCACTT CGGCTGGGTG GTCGCCCTCG GCGTCTCCAC CACGCTCATC CCCGCGCTCA TGGAGCAGGT CGACCCCGAG GCCAAGGTCG CCCTCTACGG CGTGCTCACC GCCGTCGGCG CGGCGGCCGG TCTGGTCGCG AACATCCTGT TCGGCTCGCT GTCCGACCGC ACCCGCTCCC GGTTCGGCAA GCGCAACGGC TGGATCGCGG TGGGCGGCCT GGTCTCCGCC GCGTCCCTGA GCGCGATGTC CACCACCAGC TCGTTCGGGC TGCTGATCGT GCTGTACATC GGCTACCAGA TCGGCCTGAA CGCCCTGCTC GCCCCGCTCT ACGCCGTGCT GCCCGACCGG GTGCCCACCG AGCGCCGCGG CCTGGCGTCG GCGGTCATCG GCCTCGGGAT GCTGCTCGCG CAGAGCGCGG GCGCGGTCAT CGGCGCGGCG TTCCTGGACG AGATCCGCAC CGGCATGGCG ATCATGCCGT GGGCGATCGC GGTCACCGCG CTGGTCTTCG CCGTCTTCGC CAAGGACCGC CCCAACCTCG ACGAGCCGCG CGAGGCGTTC TCCCTGGTCG AGCTGGCCCG CACCTTCAAG GTCCCGGCCG ACCGCGACTA CCTGCTCGCC CTGTTCGGCA GGCTCACCCT GCTGCTGGCC TACTTCTCCG CCACCCTCTA CCAGCTGTTC ATCCTGCAGG ACTACATCAA GCTCGACGCG GCGGGCGTGG CGGGCACCGT CGCGCTCGCG GGTGTGATCA TGGCAGTGGC CTCCGGGATC GGCACGCTGA TCTCCGGCCC GCTCTCCGAC CGCATCGGCA GGCGCAAGCC GCTGATCATC CTGGCCTCGC TGATCATCGC GGGCGCGTTC GTCCCGCTGG CGCTGGTGCC CACGCGCGGC ATGTTCCTGA CCTTCATCGC GCTCGGCGGC TTCGCGTACG GCATCTACAT CGCGGTCGAC CAGGCGCTGC TCAGCGACGT GCTGCCCAGC GACGCCAACC ACGGCAAGGA CATGGGCATC CTGAACGTGG CCAACACCGC GCCGCAGTTC CTCGCCCCCG GCGTCGCCGG GCTCGCCCTC GCCTCCGGCA TCGGCTACAG CGGCCTGTTC CTCGTCTCCG CCGGGCTCGC GGTGTTCTCG GCGTTCCTGA TCACGGGCAT CAGGCGCGTG CGCTGA
|
Protein sequence | MSQTTAGTPS PSASEPSGPP VPARLGKLGP LLFQAHFGWV VALGVSTTLI PALMEQVDPE AKVALYGVLT AVGAAAGLVA NILFGSLSDR TRSRFGKRNG WIAVGGLVSA ASLSAMSTTS SFGLLIVLYI GYQIGLNALL APLYAVLPDR VPTERRGLAS AVIGLGMLLA QSAGAVIGAA FLDEIRTGMA IMPWAIAVTA LVFAVFAKDR PNLDEPREAF SLVELARTFK VPADRDYLLA LFGRLTLLLA YFSATLYQLF ILQDYIKLDA AGVAGTVALA GVIMAVASGI GTLISGPLSD RIGRRKPLII LASLIIAGAF VPLALVPTRG MFLTFIALGG FAYGIYIAVD QALLSDVLPS DANHGKDMGI LNVANTAPQF LAPGVAGLAL ASGIGYSGLF LVSAGLAVFS AFLITGIRRV R
|
| |