| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2978 |
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| Symbol | |
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| ID | 8327167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 3442929 |
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| End bp | 3444758 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644943503 |
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| Product | Xylan 1,4-beta-xylosidase |
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| Protein accession | YP_003100744 |
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| Protein GI | 256377084 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTCCA CCGACCCCTC CCCTGACTTC ACCGACCTCA ACGGCAACGG CGTGCTCGAC
CCGTACGAGG ACCCAGGGCT CACCCCCGAG GAGCGGGCCG ACGACCTGCT CGGGCGGCTG
AGCCTCGCCG AGAAGGTCGG CCTGATGTTC CACACCGTCA TCGAGCCCGG CCCCGGCGGC
GAGCTGCTCG ACACCCCCGG CCGGATCAGC AAGAGCCCCA CCCGCGAGGT CGTGGGCGTG
AAGCACCTCA CGCACTTCAA CGTGCACGCC CTCGGCACCG CCCGCGAGGC CGCGCGGTGG
AACAACGCGA TCCAGCGGCT GGCCCGCACC ACCCCGCACG GCGTCCCGGT GACCATCAGC
ACCGACCCCC GGCACGCGTT CACCGAGAAC TCGGGCGTGT CGTTCACGGC GGGCGCGTTC
TCCCAGTGGC CGGAGTCACT GGGCCTGGCA GCGCTGGGCG ACCCCGAGGC GGTGCGCCGG
TTCGCCGACA TCGCCCGCCG CGAGTACCTG GCCGTGGGCA TCCGGGCCGC GCTGCACCCG
CAGGTCGACC TGGCCACCGA GCCGCGCTGG GGCAGGCAGG CGCAGACGTT CGGCAGCTCG
GCCGAGCGCG CCGCCCGCTA CGTCGCCGCC TACCTGGACG GGTTCCAGGG CGCGGAGCTG
GGACCGGGCA GCGTGGCGTG CACCACCAAG CACTTCCCCG GCGGCGGCCC GCAGAAGGAC
GGCGAGGACG CGCACTTCCC GTACGGGCGC GAGCAGGTCT ACCCCGGCGG GCGGTTCGAG
GAGCACCTGG CGCCGTTCCG GGCGGCGATC GCGCGCGGGA CGGCGGCGAT CATGCCCTAC
TACGGGATGC CGGTCGGGCT GGAGCTCGGC GGCGAGCCGG TGGAGGAGGT CGGGTTCGGC
TACAACAGGC GGATCGTCAC CGGTCTGCTG CGCGACGAGC TCGGGTACGA CGGGGTCGTG
GTGACCGACT GGGAGCTGGT CAACGACAAC GTCGTGGGCG ATCGGGTGCT GCCCGCGCGG
GCGTGGGGCG TGGAGCACCT GGACCCGCGC GGGCGGATGC TGAAGGTGCT GGAGGCCGGG
TGCGACCAGT TCGGCGGCGA GGAGTGCGTG GACCTGCTGC TGGACCTGGT GCGGTCCGGG
GAGGTCGGCG AGGCGCGGAT CGACGTGTCC GCGCGCAGGC TGCTGCTGGT CAAGTTCCGA
CTGGGTCTGT TCGACGACCC GTTCGTCGAC GAGGACGCGG CCGAGGAGGT CGTCGGGGCG
GCGGAGTTCG TGCGCGCGGG CCGTGAGGCG CAGTCCCGGT CGGTGACCGT GCTGGAGAAC
CGGGGCGGCC TGCTGCCGCT CACCGGACGG CGCCGGGTGT ACGCGGAGGG CCTGACCGCG
GAGGCGGCGG CCAGGCTGGG CGAGGTCGTG CCCGATCCGG CGTCGGCGGA CCTGGCCGTG
GTGCGCCTGA ACGCCCCCTA CGAGCACCGC GACGACCTGT TCCTGGAGGC CTGGTTCCAC
CAGGGCTCCC TGGACTTCCC ACCCGGCCTG GTCTCCCGCC TGGCCCGCGT CGCCGCCGCC
GCACCGCTGG TGCTCGACGT GACCCTGGAC CGCCCCGCCG TGCTCACCCC GCTGGCCGAG
CTGGCGAGCG CGCTGGTCGT GGACTACGGC ACGTCCGACG AGGCCCTGGT GGACGCCCTG
ACCGGCGTGA CGCCCCCGGA GGGCAGGCTG CCGTTCGAAA TCCCCCGCTC GATGGCGGCC
GTGCGGGCGT CCCGCGAGGA CGTGCCGGAC GACACCGCGA ACCCGCTGTA CCCGGCCGGT
CACGGGCTGG GAGGTAGCCT GCCGGCATGA
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| Protein sequence | MGSTDPSPDF TDLNGNGVLD PYEDPGLTPE ERADDLLGRL SLAEKVGLMF HTVIEPGPGG
ELLDTPGRIS KSPTREVVGV KHLTHFNVHA LGTAREAARW NNAIQRLART TPHGVPVTIS
TDPRHAFTEN SGVSFTAGAF SQWPESLGLA ALGDPEAVRR FADIARREYL AVGIRAALHP
QVDLATEPRW GRQAQTFGSS AERAARYVAA YLDGFQGAEL GPGSVACTTK HFPGGGPQKD
GEDAHFPYGR EQVYPGGRFE EHLAPFRAAI ARGTAAIMPY YGMPVGLELG GEPVEEVGFG
YNRRIVTGLL RDELGYDGVV VTDWELVNDN VVGDRVLPAR AWGVEHLDPR GRMLKVLEAG
CDQFGGEECV DLLLDLVRSG EVGEARIDVS ARRLLLVKFR LGLFDDPFVD EDAAEEVVGA
AEFVRAGREA QSRSVTVLEN RGGLLPLTGR RRVYAEGLTA EAAARLGEVV PDPASADLAV
VRLNAPYEHR DDLFLEAWFH QGSLDFPPGL VSRLARVAAA APLVLDVTLD RPAVLTPLAE
LASALVVDYG TSDEALVDAL TGVTPPEGRL PFEIPRSMAA VRASREDVPD DTANPLYPAG
HGLGGSLPA
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