Gene Amir_2977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2977 
Symbol 
ID8327166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3442342 
End bp3442932 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content72% 
IMG OID644943502 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100743 
Protein GI256377083 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGG AGACCGCCGG GACCAGGCGC GGCCCCTACC GCAAGGGCGT GGAGCGCAGG 
CGGAGGATCG TGGAGACGGC GGTGGAGGTG TTCGCCGCCA AGGGGTACAC CAGCGGGTCG 
ATGCGCGAGA TCGCCACGCG GGTCGGCCTC ACCCAGGCCG GGCTGCTGCA CCACTTCGCC 
GACAAGGAGG AGCTGCTCAC CGAGGTCCTG AACGCGCGGG ACGGCTCGGT GGACGCGGCG 
CTGGCCGAGC GGGAGGCGAC CACGCTGCGG GAGGCGCTCG CCGGGATAGC CGAGCACAAC 
CGGCGCGAGC AGGGCCTGAC CTCCGTGTTC ACGATCCTGT CCGCGGAGGC GACGAACGAG 
GACCACCCCG CGCACGGGTA CTTCACGCGG CGGTACCGGG AGCAGCACGC GGCGTCGGTG 
GCGGCGGTGC GTGCGGAGCA GGCGGCAGGA CGGATGCGCG CGGACGTGCC GCCGGAGGTG 
CTGGCGTCGC TGCTGATCGC GGCGCTGGAC GGCTTGCAGC TGCAGCAGTC CTACCTGCCG 
GAGATCGACC CGACCGAGGT GCTGGAAGCG CTGTTCACCG AGCGGGACTA A
 
Protein sequence
MTQETAGTRR GPYRKGVERR RRIVETAVEV FAAKGYTSGS MREIATRVGL TQAGLLHHFA 
DKEELLTEVL NARDGSVDAA LAEREATTLR EALAGIAEHN RREQGLTSVF TILSAEATNE 
DHPAHGYFTR RYREQHAASV AAVRAEQAAG RMRADVPPEV LASLLIAALD GLQLQQSYLP 
EIDPTEVLEA LFTERD