Gene Amir_2974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2974 
Symbol 
ID8327163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3440231 
End bp3440830 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content72% 
IMG OID644943499 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100740 
Protein GI256377080 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGGGG GTTATCTCAA AGGCCGGATC CGCCGGGAGG ACATCATCAC GGCGGCCATG 
GAGCTGTACG GCGAGGTCGG CTACCACGGC GCCTCGCTGC GCGAGACAGC GAAGCGGGTG 
GGCATCTCGC ACGCGGGGCT GATCTACCAC TTCCCCACCA AGGAGTCGCT GCTCGCCGCC 
GTCCTGGAGC GCAGGGACGC CGAGGACGTC GAGCGCGAGC AGCTCACCTC CGGCCCGCCC 
GGCGCGCGGG TGCTGCGCCA GTACCTCGCG CTGACCGCGC ACAACGCCGC GCACCCCGGC 
ATCGTCGACC TGTACTCGCG CCTCGCGGCG GAGGCGACCA GCCCGGACCA CCCGGCGCAC 
GAGTACTTCG TCCAGCACTA CCGGGGCGCG CGCGAGGGCG TCCTGGAGTC GTTCGAGGTG 
CTGGCCGCGT CCGGCGGTCT GCGGGACGGG GTGGAGCCCA AGAGCGCCGC GCTGGTGTTC 
ATCGCGCTGA TGGACGGCCT GCAGGTGCAG TGGCTCACCT CGCCGGAGGA CGTCGACCTG 
GTCGGCGTGC TGCGCGCCCA CCTGCGCACG GTCCTGGCCG ACCCGCTCGA CCTCGACTGA
 
Protein sequence
MTGGYLKGRI RREDIITAAM ELYGEVGYHG ASLRETAKRV GISHAGLIYH FPTKESLLAA 
VLERRDAEDV EREQLTSGPP GARVLRQYLA LTAHNAAHPG IVDLYSRLAA EATSPDHPAH 
EYFVQHYRGA REGVLESFEV LAASGGLRDG VEPKSAALVF IALMDGLQVQ WLTSPEDVDL 
VGVLRAHLRT VLADPLDLD