| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2970 |
|---|
| Symbol | |
|---|
| ID | 8327159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3435371 |
|---|
| End bp | 3436999 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644943495 |
|---|
| Product | TAP domain protein |
|---|
| Protein accession | YP_003100736 |
|---|
| Protein GI | 256377076 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.32712 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGAACTT CACTGGGGGA ATCACCGAAT CGGAATCCCG GCTCCTCGCC GGTCCGCCGA
CTGCGCCGGG CGGCGGGCCT CGCCCTGGCC GCGCTGCTCG CGCTGCCCGC CGTCACCGCC
GCCACGGCCA CCACCGCGGC CGCCGATCCC GGCAGCGGCG GCAGGCTCAC CTGGAACGCC
TGCCAGGACG GGTTCCAGTG CGCGACGCTG GAAGTCCCGA TGGACTACAC CAACGCCCTG
GGCGCCGCGG TCGACCTGGC CGTCATCAAG CTGCCCGCCA CCGACAAGAC CCGGCGCGTG
GGCACCCTGT TCGTGAACTT CGGCGGCCCC GGCGCGTCCG GGCTGCAGCG GATGCGCGAG
CGCGGCCGGT GGCCGTGGCT GTTCTCGGCG GAGCTGCGGG CGAGGTTCGA CGTGGTCTCG
TGGGACCCGC GCGGCATCGG CGCGAGCACC GCCGTGCGCT GCTTCGACAC CCTCGCCGAG
CAGCAGGCGT ACCTGGGGTC GATGCCCGAG CTGCCCGGCG ACCCGAGCGG CGAGCCCGCG
TTCTTCGCGG CGTCCCGCGA CCTCGCCGAG CGCTGCGGCG AGGAGGCGGG CGACCTGCTG
GAGCACGTGT CGTCCGCGAA CACCGCCCGC GACCTGGACA GGCTGCGCCA GGCCCTCGGC
GAGGACAAGC TGACGTACCA CGGCATCTCG TACGGCACCC AGCTCGGCGC GATCTACGCG
AACCTGTTCC CGGACCGGGT CCGCGCGATG GTGTTCGACG GCTCCATGGA CTTCGTCGGC
AACGTCACCG GCCACGGCGA CCAGGGCACG ACGGTCCCGC TGGACACCAG GCAGGGCGTG
TCGGACGCGA TCGCCGAGAC GTTCGACGAG TTCCTGCGGC TGTGCGCGGA GGCCGGTGAC
GCCTGCGCGT TCGGCGGGGG CGACCCGAGG GCCAAGTGGG AGGCGGTCAT GGCGCGCGCC
GAGCGCGGCC CGATCACCGT CCAGGGCGAG GACGGCCCGC AGACGTGGAC CCGGTCGGCG
ATCTTCACCA CGGCGGGCGA CCTGTCGGCG CTCAGCGGGT GGCCGGACAT CGCCGCGCTG
CTCCAGAGCC TCCACGAGGC GGTGCGGGCC GAGGCGATGT CCGCCGAACC CGCCGCCACG
CGCGCCGCCA CCGCCACCGC CGCCCCGCGC GAGCTGTACA CGTCGAACCG CACCGAGGCG
TTCAACGCGA TCCAGTGCGT CGACAGCGAC TTCCCGACCG ACGAGTCGGT GTACCGCGCG
CACGCCGCCT CGGAGGACCG GCGGGTGCCG CACTTCGGCC GGATCGGCGT GCTGGACATG
ATGAGCTGCG CGTACTGGCC CGCCCGCGAC GCGAACCGCT ACACCGGCCC GTGGAACCGC
TGGACCTCGG CGGAGATCCT GGTGATCAAC AACCGCTACG ACCCGGCGAC CCCGCTCGCG
GGCGCGCGGG CGGGCGCCGC CCAGCTGGCG CGGGCGCGGG TCTTCGTCAC CGAGGGCCAC
GGCCACTCGA CCATGCTGTC CCCCAGCACC TGCACCGAGC GGGTGAAGCT GGACTACCTG
GTCAGCGGGG CGTTCCCGGC GGCGGGCACC CGCTGCGGCA ACGACGCGCC GAACCCGTTC
ACCTCCTGA
|
|---|
| Protein sequence | MRTSLGESPN RNPGSSPVRR LRRAAGLALA ALLALPAVTA ATATTAAADP GSGGRLTWNA
CQDGFQCATL EVPMDYTNAL GAAVDLAVIK LPATDKTRRV GTLFVNFGGP GASGLQRMRE
RGRWPWLFSA ELRARFDVVS WDPRGIGAST AVRCFDTLAE QQAYLGSMPE LPGDPSGEPA
FFAASRDLAE RCGEEAGDLL EHVSSANTAR DLDRLRQALG EDKLTYHGIS YGTQLGAIYA
NLFPDRVRAM VFDGSMDFVG NVTGHGDQGT TVPLDTRQGV SDAIAETFDE FLRLCAEAGD
ACAFGGGDPR AKWEAVMARA ERGPITVQGE DGPQTWTRSA IFTTAGDLSA LSGWPDIAAL
LQSLHEAVRA EAMSAEPAAT RAATATAAPR ELYTSNRTEA FNAIQCVDSD FPTDESVYRA
HAASEDRRVP HFGRIGVLDM MSCAYWPARD ANRYTGPWNR WTSAEILVIN NRYDPATPLA
GARAGAAQLA RARVFVTEGH GHSTMLSPST CTERVKLDYL VSGAFPAAGT RCGNDAPNPF
TS
|
|---|
| |