Gene Amir_2948 details

Gene Information

• Locus tag: Amir_2948
• ID: 8327137
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 3403372
• End bp: 3405324
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 75%
• IMG OID: 644943474
• Product: hypothetical protein
• Protein accession: YP_003100715
• Protein GI: 256377055
• TIGRFAM ID: [TIGR02243] conserved hypothetical protein, phage tail-like region

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGCCCG CCCCGAACCT CGACGACCGC CGGTTCCAGC AGCTCGTGGA CGAGGCCAAG 
CGGTACGTCC AGCAGAGCTG TCCGGAGTGG ACGGACCACA ACGTCTCCGA CCCCGGCGTC 
ACGCTGATCG AGACCTTCGC GCACATGGTC GACCAGCTGG TGTACCGGCT GAACCGGGTG 
CCGGAGAAGA ACCACCTGGC GTTCCTCGAC CTGCTCGGCG TCAGCCTGTT CCCGCCCACC 
GCCGCCCGCG CGGGCGTCAC GTTCTGGCTG TCCGCCGCCC AACCGGACAC CGTGCTGCTG 
CCCGCCGGGA CCGAGGTCAC CACGATCGGC GGCGAGAGCA CGGGCGGTGT CGTGTTCGCC 
ACCACCGACG ACCTGCCGAT CGTGCCGTGC GAGCTGGAAC GGCTGGTCAC CCGCACCGAG 
GGCGGCGAGC ACGCCGACCG CACCAGGGAC CTGCGCGGCA ACGCCGACGT CGACCCGGAC 
ACCCGCAAGA ACGTCCAGGT GTTCCAGCCC TCGCCGCGCG CGGGCGACGC GATGCTGATC 
GGCCTGTCGG CGGCGGTGCC GCGCTGCGCC GTCGTGCTGC GCCTGGACAG CAGCGTGGAG 
GGCATCGGCG TCGACCCGAG GCAACCGCCG CTGGTGTGGG AGGCCTGGGA CGGCGCCGGG 
TGGGCGCCGT GCGAGGTCGA CGAGGACGGC ACCGGCGGGC TGAACCGGCC CGGCGAGGTC 
GTGCTGCACG TGCCCGCCGG GCACGTCGAG TCGAACGTCG CGGGCAGCAC CGCCGGGTGG 
TTGCGCTGCC GCGTCGTGGA ACCCGTCACG GGGCAGCCGT TCTACTCCGA GTCGCCGACC 
GTGCGCGAGG TGGAGGCCTA CACCATCGGC GGCACCGTCG TCGCCGAGCA CGCCGAGACC 
AGCACCGACG TCGTCGTCGG CGAGTCGGCC GGGGTGCCGG GCCAGCGGTT CCCGCTGCCC 
TCCGCGCCGG TGCTGCTGGA CGGGCCGCCC GTGGTCGTGC AGGTCTCCGA GGGCGAGGGC 
TGGGTCGACT GGTCCACGGT GGACGACTTC GGCTCCTCGG GGCCGGACGA CCGGCACGTC 
GTGCTCGACG CGGGCACCGG CGAGCTGCGG TTCCCGCCCG CCGTGCGCGA GGCCGACGGC 
GGGCTGCGCC GCTACGGGGC CGTCCCGGCC AAGGGCGCGG TGATCCGGGT CCCCCGCTAC 
CGCACCGGGG GCGGGCGCGG CGGCAACGTG GCGCGCGGCG CGATCTCCGT GCTGCGCAGC 
TCCGTCCCGT ACGTGGCGGA GGTGGTGAAC CGGGAGGCGG CGCGCGGCGG CGTGGAGGCC 
GAGACCGTGC CCGAGGCCAA GCAGCGGGTG CCCAACCAGC TGCGCGCCCA GTGGCGGGCG 
GTCACCGCCG AGGACCACGA GCTGCTCGCC AAGCAGGCCG CGCCGTCGCT GGCGCGGGTG 
CGCTGCCTGC CCGCCGAGCA CGGCGCGCGG GTGCTGCTGG TGCCCGACGC GGTGGCCGAC 
GAGGACGACC GGTTGCGGTT CGAGCAGCTC ATGCCGGGGC AGGAGCTGCT GACGACGGTG 
GCCCGGTACC TGGAGGAGCG CAGGCTCATC GGCAGCCGCC TGGTGGTGGA ACCGCCGCGC 
TACCAGGGGG TCACGGTCGT GGCGCGGCTG GTGGCCGCCG AGTCCGAGGC CGAGCGGGTG 
CGGCGCGAGG CGCTGGCCGC CCTGCACCGC TACCTGAACC CGCTGCGCGG CGGGCGCGAC 
GGCGAGGGGT GGGAGTTCGG CAGGCCCGTG CAGTTCGGCG AGGTGTTCGC GGTGCTGCAA 
CGGGTTCCGG GGGTGTCGCT GGTGGAGGAG ATCCGGATGT TCCCGGCGAA CCCGATCACC 
GGGGCGCGCG GCGGGCCGGT GGAGCGGCTG GAGATCGCGC CGAACGCGCT GGTGTTCTCG 
CACCAGCACC AGGTCGCGGT GGAGCAGCGG TGA 

 

Protein sequence

MLPAPNLDDR RFQQLVDEAK RYVQQSCPEW TDHNVSDPGV TLIETFAHMV DQLVYRLNRV 
PEKNHLAFLD LLGVSLFPPT AARAGVTFWL SAAQPDTVLL PAGTEVTTIG GESTGGVVFA 
TTDDLPIVPC ELERLVTRTE GGEHADRTRD LRGNADVDPD TRKNVQVFQP SPRAGDAMLI 
GLSAAVPRCA VVLRLDSSVE GIGVDPRQPP LVWEAWDGAG WAPCEVDEDG TGGLNRPGEV 
VLHVPAGHVE SNVAGSTAGW LRCRVVEPVT GQPFYSESPT VREVEAYTIG GTVVAEHAET 
STDVVVGESA GVPGQRFPLP SAPVLLDGPP VVVQVSEGEG WVDWSTVDDF GSSGPDDRHV 
VLDAGTGELR FPPAVREADG GLRRYGAVPA KGAVIRVPRY RTGGGRGGNV ARGAISVLRS 
SVPYVAEVVN REAARGGVEA ETVPEAKQRV PNQLRAQWRA VTAEDHELLA KQAAPSLARV 
RCLPAEHGAR VLLVPDAVAD EDDRLRFEQL MPGQELLTTV ARYLEERRLI GSRLVVEPPR 
YQGVTVVARL VAAESEAERV RREALAALHR YLNPLRGGRD GEGWEFGRPV QFGEVFAVLQ 
RVPGVSLVEE IRMFPANPIT GARGGPVERL EIAPNALVFS HQHQVAVEQR