Gene Amir_2947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2947 
Symbol 
ID8327136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3402965 
End bp3403372 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content71% 
IMG OID644943473 
ProductGPW/gp25 family protein 
Protein accessionYP_003100714 
Protein GI256377054 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGGGT TCATCGGCCG GGGTTGGGGC TTCCCGCTCG GCGTCGACGC GCGCGGCGGC 
ATCGGCATGG TCGAGCGCGA GCAGGAGATC CAGGAGGCCG TGCGGCTCAT CCTCGGCACC
GCGCCCGGCG AGCGGCCCAT GCGCCCGGAG TTCGGCTGCG GCATCCACGA CCTGGTGTTC
GCCTCCGCCG ACGGCGCCAC CGCCGGTGAC ATCTCCCGCG AGGTGCGCAC CGCACTGGAG
CGCTGGGAGC CGCGCATCGA GGTCACCGAC GTGGTCGTCG CGTTCGACGC GGTCGACACC
GGCACGCTCT ACATCGACGT GCGCTACCTG GTCCGCAGCA CCAACGACCC GCGCAACCTG
GTCTTCCCCT TCTACACCAT CCCCTCCGAG GAGAGCGAGG TCGTCTGA
 
Protein sequence
MSGFIGRGWG FPLGVDARGG IGMVEREQEI QEAVRLILGT APGERPMRPE FGCGIHDLVF 
ASADGATAGD ISREVRTALE RWEPRIEVTD VVVAFDAVDT GTLYIDVRYL VRSTNDPRNL
VFPFYTIPSE ESEVV