| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2933 |
|---|
| Symbol | |
|---|
| ID | 8327122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3386532 |
|---|
| End bp | 3388601 |
|---|
| Gene Length | 2070 bp |
|---|
| Protein Length | 689 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644943459 |
|---|
| Product | AAA ATPase central domain protein |
|---|
| Protein accession | YP_003100700 |
|---|
| Protein GI | 256377040 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0464] ATPases of the AAA+ class |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCACCG ACGAGGGGCT GCTCGGCGTG GTGGGCGAGG TGGCCGGGAG CGAGGAGCAG
GACGCCGACC TGGTGTACCT GTGGGCGCGT CTGGGGGCCG TCGAGTGGCG GGTGCGGCTG
GCCGTGGAGG CCCGGCGCGC CACCGACCCG GCGCCCGACG ACCCGTACCG GGGCCTGTAC
TTCACGCCCG AGGCCGTGCA GCGGGTGCTG GACGCCCCGC GCGTCCCGCG CCTGTTCCCG
CCCGAGGACG ACGTCGACCT GGACGCGCTG GCCGCGCTCG CGCCCGCGCC GGGACCGCGC
CTGCTCGTGC TGGCGCGGGA GTTCGGGCTG GACCCGCTGG ACGTGGAGCT GCTGCTGGTC
GCGCTCGCCC CCGACGTCGA CACCAGGCTC GAACGCCTCT ACGGCTACCT CAACGACGAC
ATCACCCGCC GCCGCGCCAC CACCGGCCTC GCGCTGGAGC TGTGCGGCCT GCCGCCCGCC
GGGCCCGGCC GGTTCCGGCT CGCGCCGTCC GCGCCGCTGG TCGCGCGCGG CCTGGTGGAG
GTGCAGCAGG ACGACGCGCC CGCGCTGTCC AGGGTGCTGC GGGTGCCCGA CCGGGTCGTG
GCGCACCTGC TCGGCGACGA CAGCCCGGAC CACGCGCTCA CCGGCGTCGC CCGCCTCGAA
CCGCCCGCGC CGCCCACCGG GGAGCCGGCC GTCCGGCTGG CCCGCGCGGT GCGCGGCGGC
GTCCACCTGG TCCACCTGCG CGACAGCGGC GGCGAGGCCG CGCGCACCGC CGTGGAGGCG
CTGCCCGGCG CGGTCGTGGT CGACCCGGCC GCGCTCACCG CCACGTCGCT GCCCGCCGTG
GTGCGGGAGG CCCGGCTGCG CGGCGCGGGC GTCGTCCTCG GGCCGCTCGA CGACCTGCCG
CGCGAGCGCG CCGGGCTGCT GCGCGAGCTG GCCGCGCTCG CCGAGGGCGT CCCGCTGCTG
CTGCACGGCG CCGCCCACTG GGACCCGCGT TGGACGCCCC GGCCCGCGGT TCCGGTGCAG
GCGCCCAGGT CCGACCCGGA CCAGCGGGCC CGCCGCTGGG AGCGCGCGCT CGGCGGTGGC
TCCGTCGACG GGCTGGACCT GGCCGCGCTC GCCGCCTACC GGCTCGGCGA CGACGAGGTC
GGGCACGCCG TCGCCGTCGC CACCGGGCTC GCCGCGCTCG ACGGCGGCCC GGTGCGGCAG
GAGCACCTGG GCGCCGGGGT GCGCGCCCGC AACGCCGCCG GGCTCGACCG GCTGGCCCGC
AGGGTCGTGC CCGCCGTCGG CTGGGACGAC CTCGTGCTGC CCGAGCCGAC CCGGCGGCAG
CTCACCGAGC TGGTCGTGCG CGCCCGGCAC CGCGACCGGG TGCTCGGCCA GTGGGGGATG
CGGCCCGGAG GCGGGCGCGG GCGTGGCGTG GTCGCGCTGT TCGCGGGCGG CTCCGGCACC
GGCAAGACCA TGTCCGCCGA GGTGGTCGCC GCCGCGCTCG GCGTCGACCT GTACGTGGTG
GACCTGTCGA CCGTGGTGGA CAAGTACGTC GGCGAGACCG AGAAGAACCT GGAGCGGATC
TTCACCGAGG CCGCCGGGGT GCACGGCGTG CTGCTGTTCG ACGAGGCGGA CGCGGTGTTC
GGCAAGCGCT CCGAGGTGCG CAGCTCGAAC GACCGGCACG CGAACATGGA GTCGGCGTAC
CTGCTGCAGC GCATGGAGTC CTTCGACGGG ATCGCGGTGC TGACCACGAA CCTGAAGTCC
AACGTGGACG AGGCGTTCAC CCGGCGGATC GACGTGATCG CGGACTTCCC CGAGCCGGAC
GCCGCGCACC GGCTGCTGCT GTGGGACCGC TGCCTCGGCC GCGTGCTGCC CCGCGACCCG
GACGTGGACC TGGGGTTCTG CGCCGAGCGG TTCGAGCTGG CGGGCGGTTC GATCCGGGCG
TGCGCGGTGA CGGCCGCCTA CCTGGCGGCC GAGGCCGACC GGCCGCTGCG GATGGCCGAC
CTGGTCACGG CGGTGCGCCG CGAGTACGGC AAGCTCGGCA GGCTCGTGCT GGACAGCGAG
TTCGGGCACT GGGCCGGGCA GCAGGGGTGA
|
|---|
| Protein sequence | MTTDEGLLGV VGEVAGSEEQ DADLVYLWAR LGAVEWRVRL AVEARRATDP APDDPYRGLY
FTPEAVQRVL DAPRVPRLFP PEDDVDLDAL AALAPAPGPR LLVLAREFGL DPLDVELLLV
ALAPDVDTRL ERLYGYLNDD ITRRRATTGL ALELCGLPPA GPGRFRLAPS APLVARGLVE
VQQDDAPALS RVLRVPDRVV AHLLGDDSPD HALTGVARLE PPAPPTGEPA VRLARAVRGG
VHLVHLRDSG GEAARTAVEA LPGAVVVDPA ALTATSLPAV VREARLRGAG VVLGPLDDLP
RERAGLLREL AALAEGVPLL LHGAAHWDPR WTPRPAVPVQ APRSDPDQRA RRWERALGGG
SVDGLDLAAL AAYRLGDDEV GHAVAVATGL AALDGGPVRQ EHLGAGVRAR NAAGLDRLAR
RVVPAVGWDD LVLPEPTRRQ LTELVVRARH RDRVLGQWGM RPGGGRGRGV VALFAGGSGT
GKTMSAEVVA AALGVDLYVV DLSTVVDKYV GETEKNLERI FTEAAGVHGV LLFDEADAVF
GKRSEVRSSN DRHANMESAY LLQRMESFDG IAVLTTNLKS NVDEAFTRRI DVIADFPEPD
AAHRLLLWDR CLGRVLPRDP DVDLGFCAER FELAGGSIRA CAVTAAYLAA EADRPLRMAD
LVTAVRREYG KLGRLVLDSE FGHWAGQQG
|
|---|
| |