| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2931 |
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| Symbol | |
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| ID | 8327120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3382591 |
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| End bp | 3385680 |
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| Gene Length | 3090 bp |
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| Protein Length | 1029 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644943457 |
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| Product | WD40 domain protein beta Propeller |
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| Protein accession | YP_003100698 |
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| Protein GI | 256377038 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCACCA GGTTCAGGGC CGTCGTGGTG GCGGTCGTGG CTGTGCTGCT CGGCGGCGTC
GTGGTGGTGC TGCACAGCGG CGTGGCGCCC GCCCAGCAGG ACGACCCGCC ACCGCCGCAG
CGGATCGCGT ACGCGGGCAC CGAGCACCGG GGCATCGGCC AGTTCCCCGC GCCGCAGAAC
GGTTACCCGA CCAACGCCCC CAGCCCTCCG CTGCTCCCCG ACCGGCCAGC GCACTTCGAC
GACGAGGTGT CGGCGCGCGG CGGGCTCGTG GTGTTCGTCA GCATGAGGGC GGAGAAGCTG
CCGCAGGTGT TCCTGCGCCA GCGGGACGGG TCCGTCGTGC AGCTGACCGA GGGCATGTAC
GCCTGCCACC CGCAGCTCAC CCCCGACCTG GGCACCGTGG TGTTCCAGCA GGTCCGGGGC
GACGGGAGCG GCGAGCTGTG GGCGGTCGAC GTCGACGGGA CGAACCTGCG CCGCATCACC
CCCGAGGGCG CCGACCCCGA GGAGTGGCCC ACGATCTCCC CGGACGGGCT GCGCGTCGCG
TTCAGCGCGG GCGGGCAGAT CCGCAGCAGG CCCCTCGCGG GCGGCCCCTC CACGCAGCTC
ACCGACGAAC CCGGTGGTGG CGCGGGCGAA CCGGTGTGGC ACCCGACCGA GGACCGGATC
GTCTACAAGG TCGGCGCGGG GCGCGCCCGG CTGCGCGTGC TGGAGGACGG GGCCAGCCGG
GACTTCTTCG CCGAGAACCA GGCCGGGTGG AACGGCCGGT GGCCGGTGTG GATGCCGGAC
GGGCAGGGGC TGCTGTTCAT CAGCTGCGGT TGCCTGGAGG AGGACCCCAG GGAGGGCGTG
TACCGGGTCG CGGGCGACGG CGGTGAGCCG GTCGGGGCCG CGCCGCAGCT GCTGCTCAGG
GAGGACCGGC AGGTCAGCGC GCCCGCCTGG ATCGGCGACC CGCTCACCGG GACGCTGCTG
ATCGCCCGCA CCACCGCGTC GGTGCGCAAC GAGGTGCGGT TGCAGGACAT CCAGCCGGAC
GGGACCGATC CCAGGGACCT CGGGATCGCG CTCGCGCTGG AGCACCCGGA CATCGCGTCC
GACTCCAGGC TGCTGTTCAA GCCGACCGGC GGCTACGACC CGTGGACGCT GCGGCAGACC
TACTCCCCGG ACGGCCGCAA GATCGTCTAC ACCGCCTTCG AGGGACCGCT CGGCTCGCGC
CTGCAGCGGA TCTGGACCGC GAACGCGGAC GGCTCGGACC CGGTGCGGCT GAACGTCTCC
GACCGGCTGC CCACCGACTG GGAGTTCGAC CCGGCCTGGT CGCCGAACGG CGAGCAGATC
GCCATCACCC GCCGCTCGCC CGGCGGCATC CGGCCTGACA ACGGGCCGAG CCGGATCGCG
GTCGTGGACG CCTCCACCGG CCAGGTCCTG CGCGAGCTCG TCGCCCCGCC CGGCGCCGAG
GACCAGGAGG ACACCCAGCC CGCGTGGTCG CCGGACGGGC GCACCCTGTC GTTCACCAGG
GGCGTGGTGT TCGACGACGA GACCGGCACC GAGGTGCGCG ACAACCACAT CTGGACCGCC
GACGCGGCCA CCCTGGGCAA CCAGCGCGAC ATCAGCGAGA TCGTGTGCGG GGCCGCCTCG
CCGTGCGAGG TGACCGACGA CAGCTCGGTG TTCAGCCCCG ACAGCGGCGA CCTGGTGTTC
AACCGCGAGC AGGACGCGCT CATCTCGTTC GACCTCGACC GGGAGACCTG CCGGGTGCTC
GTCCCGCAGG GCAGCACCCA GTGCGGGGCG CCCGTGGTGA ACGGGTCCGG TCCGTTCCAG
CCGCGCGACG CCGCGTTCTC CCCGGAGGGC GGGCGGCTGG TGGTCTCCAC CCGGCGCGGG
GCCGCGAGCG AGCAGCCCGA GACGTTGGCG CTGGTGGACT TCGTCGACGG CGGGCTCAGC
GAGAGCCGGG TCAACTACGC GCTCCCCGGC AGGCAGAAGG AGCCCAGCTG GCGGATCACC
GTGGACCTGG CGGTGCGGGC GCCGTCCAGC ACGCCCGAGG TGACCACCGG GCGCGGCGTC
GAGATCCCGG TGGTGGTGGC CAACAACGGG CCCGGCGTCT CGTCCACGAC CACGCTGACC
GTCGTGCCGC CCGAGGGGGT GCGGGTGGAC GAGCTGCGCA CGCCGCAGGG CACGTGCGAC
GTGGCCGAGC TCGCCTGCCA GCTCGGGGTC CTGCAACCGG ACCAGGAGGT CACGGTCGTC
GTCGTGGTCA CCGGGGTCAC GGCCGGGCGG CGCGAGATCG CCTGGGGCGT CGCGGGCGGG
GTGGTCGACC CCGAGGTGGC CGACAACAGC GCGCGCACCG TCGTGCCGGT GGTGGACGCG
CAGACCAGCA CCACCGCGCC GCCGACCACG ACCGTCCCGC CGGCCACGAC CACGCCGCCC
AGCAGCCCGC CGCCCCCTCC GCCACCGCCG CCCCCCGCGC CGCCGCAGGC CGGTCCGGCG
CTCGCGGTCG CGGTGCGGCC GAACCCGTCC TACGTCGGCG GCCGGGCCAG CGTGGTCTAC
ACCGTGCGCA ACGGCGGCGG CGCGAACGCC ACCGGGCTGC GGCTGGAGCT GGCCCTGCCG
CGGGGAATCC CGGTCGCGGC GCTGCCCCCC GGCTGCTCGG CGACGGCCTG CGCGCTGCGC
GACCTGCCGC CGGGCGGGAC GCAGGCGCTC ACCGTGGTGC TCGCGCCGGT GGCGCCGGGC
CAGGGGACCG CGCGCGGTGT GGTGCGCACC ACCGGCAGCG ACGACAACGC GGCCGACAAC
GCGGCCACCG CGCAGCTCCG GGTGCTGCTG CCCAGGATCG TGGCGGTGCC GCCGATCGGC
GAGCCGGGCT TCGTCACCTC GGTGCGGGGG CTGGACTTCC CGCCCGGCGT GCCGGTGCGG
CTGACCTGGA AGCCGGGCAT CACGGCGACG GCCGCGCCGA CCCTGCCCCG GCCGGACGGG
AGCTTCATCG CGCAGCTGCT GATCCTGCCC AAGGACCAGA CCGGCCCGCG CGTGATCACC
GCCTCCGGCG ACGGGTTCCG GCCTGCTACC ACGCCGTTCC TGGTGGTGCC GGGCACGATC
GGGCCGCCGG ACATGGTGAA CCGGCGGTGA
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| Protein sequence | MFTRFRAVVV AVVAVLLGGV VVVLHSGVAP AQQDDPPPPQ RIAYAGTEHR GIGQFPAPQN
GYPTNAPSPP LLPDRPAHFD DEVSARGGLV VFVSMRAEKL PQVFLRQRDG SVVQLTEGMY
ACHPQLTPDL GTVVFQQVRG DGSGELWAVD VDGTNLRRIT PEGADPEEWP TISPDGLRVA
FSAGGQIRSR PLAGGPSTQL TDEPGGGAGE PVWHPTEDRI VYKVGAGRAR LRVLEDGASR
DFFAENQAGW NGRWPVWMPD GQGLLFISCG CLEEDPREGV YRVAGDGGEP VGAAPQLLLR
EDRQVSAPAW IGDPLTGTLL IARTTASVRN EVRLQDIQPD GTDPRDLGIA LALEHPDIAS
DSRLLFKPTG GYDPWTLRQT YSPDGRKIVY TAFEGPLGSR LQRIWTANAD GSDPVRLNVS
DRLPTDWEFD PAWSPNGEQI AITRRSPGGI RPDNGPSRIA VVDASTGQVL RELVAPPGAE
DQEDTQPAWS PDGRTLSFTR GVVFDDETGT EVRDNHIWTA DAATLGNQRD ISEIVCGAAS
PCEVTDDSSV FSPDSGDLVF NREQDALISF DLDRETCRVL VPQGSTQCGA PVVNGSGPFQ
PRDAAFSPEG GRLVVSTRRG AASEQPETLA LVDFVDGGLS ESRVNYALPG RQKEPSWRIT
VDLAVRAPSS TPEVTTGRGV EIPVVVANNG PGVSSTTTLT VVPPEGVRVD ELRTPQGTCD
VAELACQLGV LQPDQEVTVV VVVTGVTAGR REIAWGVAGG VVDPEVADNS ARTVVPVVDA
QTSTTAPPTT TVPPATTTPP SSPPPPPPPP PPAPPQAGPA LAVAVRPNPS YVGGRASVVY
TVRNGGGANA TGLRLELALP RGIPVAALPP GCSATACALR DLPPGGTQAL TVVLAPVAPG
QGTARGVVRT TGSDDNAADN AATAQLRVLL PRIVAVPPIG EPGFVTSVRG LDFPPGVPVR
LTWKPGITAT AAPTLPRPDG SFIAQLLILP KDQTGPRVIT ASGDGFRPAT TPFLVVPGTI
GPPDMVNRR
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