Gene Amir_2922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2922 
Symbol 
ID8327111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3373187 
End bp3374167 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content76% 
IMG OID644943448 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_003100689 
Protein GI256377029 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGGCC CGACCTTCCG GACGCAGTTC CACGCCCCGC AGCTGCGCAG GCTGGGCGAG 
CTGGCGCAGG CCGCCGACCC GGTGTGCGTG GGCGAGCTGG ACTCGCCGGA CGCGCGGCGG 
GTGCTGCGCG GCGCCGAGGT GCTGCTGACC TCGTGGGGCT GCCCTGGGCT GTCCGCCGAG 
CGGCTGGCCG CCGCGCCCGA GCTGCGCGCG GTGTTCCACT GCGCGGGCAC GGTCCGCCCG 
CTGGTGAGCG AAACCCTGTG GCAGCGGGGA ATCCTGGTCA CCACGGCCGC CGACGACAAC 
GCGGTCCCGG TCGCCGAGTT CACGCTGGCC GCGATCGTGT TCGCGGGCAA GAAGGCCCCG 
TTCCTGGCGC AGGACGCCCG GCGGCACCGC GCCGACTGGT CGTACCGGGC CGCACGCGGC 
GAGCTGTCCA ACCGGGGCCG GGTGATCGGG CTGGTCGGGT TCTCCCGCGT GGGCAGGCGG 
GTCGCGGCGA TGCTGCGGGC GCTGGAGGTC CGGGTGCTGG TGGCCGACCC GCACGCCGAC 
GCGGCGGAGG TGCGCGCGGC GGGCGCGGAG CTGGTGCCGC TGCCGGACCT GCTGCGGGCG 
TGCGACGTGC TGTCGCTGCA CCTGCCCGCA CTGCCGTCGA CCAGCAACCT GATCGGGCAG 
CGGGAGTTGG CGCTGCTGCG CGACGGCGCC ACCGTGATCA ACACCGCGCG CGGGGCCGTG 
CTGGACACCG CCGCGCTGGA GCGCGAGTGC GCGGGCGGCA GGCTGGACGC GATCCTGGAC 
GTCACCGAGC CCGAACCGCT GCCCGCCGCC TCGGTGCTCT ACGACCTGCC CAACGTGATG 
ATCACCCCGC ACGTGGCCGG GTCGCTGGGC TCGGAGGCGC GGCGGATGAG CGACAGCGCG 
CTGGAGGAGC TGGCCCGCTA CCTGGACGGG CGCCCGCCGA GGTCGCCGGT GACGGCCGAG 
CGGCTGCGGG TGAGCGCGTG A
 
Protein sequence
MDGPTFRTQF HAPQLRRLGE LAQAADPVCV GELDSPDARR VLRGAEVLLT SWGCPGLSAE 
RLAAAPELRA VFHCAGTVRP LVSETLWQRG ILVTTAADDN AVPVAEFTLA AIVFAGKKAP 
FLAQDARRHR ADWSYRAARG ELSNRGRVIG LVGFSRVGRR VAAMLRALEV RVLVADPHAD 
AAEVRAAGAE LVPLPDLLRA CDVLSLHLPA LPSTSNLIGQ RELALLRDGA TVINTARGAV 
LDTAALEREC AGGRLDAILD VTEPEPLPAA SVLYDLPNVM ITPHVAGSLG SEARRMSDSA 
LEELARYLDG RPPRSPVTAE RLRVSA