Gene Amir_2921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2921 
Symbol 
ID8327110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3371235 
End bp3373190 
Gene Length1956 bp 
Protein Length651 aa 
Translation table11 
GC content77% 
IMG OID644943447 
Producthypothetical protein 
Protein accessionYP_003100688 
Protein GI256377028 
COG category[S] Function unknown 
COG ID[COG4289] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGCGG ACCAGGACGC GCGGGAGCTG TCCCCGTTCA CCGGCTGGAC GCGCGGGCAC 
TGGACCGCGC TGGCGGACCG GATGCTGCGC GCGCTGCGCC CGCTGACCTC GCCCGGCGGC
GCGCGGATCG TGCTGCCCGG CCCGACCGGC GGCCTCGGTG CGGACGTGGA CGGCCTGGAG
GGGTTCGCGC GCACGTTCCT GCTGGCCGGT TTCCGCCTGG CCGGGGAACG CGGCCACGAC
CCCGACCACC TGGCCGAGCG GTACGCGCAG GGCCTGGCGT CCGGCGTCGA CCCGGCCTCC
CCCGAGCGCT GGCCGCGCCC CGACGAGCAC GCCCAGGCCA AGGTGGAGGC CGCGTCGCTG
GCGCTGGTGC TGGACCTGAC GCGCCCGTGG TTGTGGGACC TGCTGCCCGA GCGCGTGCGG
GCCCAGGTGG TCGACTACCT GTCCCCGGTG GTCGGCGACG ACGGCTACCC GCGCTGCAAC
TGGCTGTGGT TCCGGGTCGT CGTGCAGACC TTCCTGCGCT CGGTCGGCGG GCCGTGGCGG
GCCGAGGACG TCGAGTCGGA CCTGGCGCTG CACGAGGGGT TCCTGCGCGC GGACTCCTGG
TACTCGGACG GCGACGAACG CGCGTTCGAC CACTACACCG GCTGGGCGAT GCACCTGTAC
CCGGTGCTGT GGTCCCGGAT GCGCGGCGCC CGCGAGCTCA CCGACAGGTC CACGGTGGAC
GTTCAGCGCC TGGACCGGTA CCTGCGCGAC CACGTGAACC TGATCGGCGC GGACGGCTCG
CCGCTGGTCC AGGGCCGCAG CCTGACCTAC CGCTTCGCCG CCGCAGCGCC GCTGTGGGCG
GGCGCGCTCG CCGAGGTCCC CTCCACCCCG CCGGGCCTGC TGCGCCGCGC CGCGTCCGGG
ATCGTGCGGC ACTTCGCCGA CCGGGGCGCG CCCGACGAGC GCGGCCTGCT CACCCTCGGC
TGGCACCGCG CCTGGCCCCG GATCGCCCAG AGCTACTCCG GCCCGTCATC GCCCTACTGG
GCCGCCAAGG GGATGCTCGG CCTGGCGCTG CCCGCCGACC ACCCGGTGTG GCGGGCGGTG
GAGGAGCCGC TGCCGGTGGA GACCGGCGAC CGGCTGTGGG TGGCCACCGC GCCGGGCTGG
CTGGTCAGCG GCACCCGCGC GGACGGCGTG GTCCGGGTGG TCAACCACGG CGCGGACCAC
GCGGTGGAGG GCGCGCACGT CGGCGACTCC CCGCTGTACG CCCGCCTCGG CTACTCCACC
GCCACCGCGC CCCCGCTGTC CGAGCGGGCC TGGAGCACCC CGGCCGACCA GTCCGCAGCG
CTGCTGGACG CGGCGGGCCG CGCCACCCAC CGCGCCGGGA TGTCGTTGCT GCGCACCGGA
CTGATCGACG ACGGCCGGGT CGCGCTCGGC GCGTCGCGGG CCCGCGCGCA CTGGCTCGCC
GACGCGCCCC CCGCCCGCGA CCACGGCTCC GGCCGCACCG GCGAGCACAC CGACGTCGCG
CTGATCACGG TGGTGTCGCT GCTGCGCGGC CCCTGGGAGG TGCGCTGCGT CCGCGTCGAC
CCGCTGCCCG AGGACCCCGG CGCGCTCGAC GCCGCGACCG CGCTGCGCGT CGGCGGCTGG
CCACTGGCCG CCCGCACCCC GCCCGAGGTG TCCGCGCTCC CCCACGGCCT GACGATCGCC
ACCGGCGACG TGGTCTCCAC CCTGCTGACC GCGGAGCCGG GCGACACCCT GGAAGCGCTT
TCCGAGCACG ACGCCAGCCC GCTCGGCCCG CACAGCGCCA CCCCGTGCGC CACGGGCCGG
ATCACCCGGA GCCGGTGGCG CGCCTACGCG ATCGGCCTGG CCAGGACCAC CGAACCGCCC
GCCGCCCCCA CCACCGGCCT GGCCGCCGCC GACCTGCGCG TCACCTGGCC GGACGGCCGC
ACGACCGCGC TCGACCTGGA CGAGTTCTCC CCCTAG
 
Protein sequence
MIADQDAREL SPFTGWTRGH WTALADRMLR ALRPLTSPGG ARIVLPGPTG GLGADVDGLE 
GFARTFLLAG FRLAGERGHD PDHLAERYAQ GLASGVDPAS PERWPRPDEH AQAKVEAASL
ALVLDLTRPW LWDLLPERVR AQVVDYLSPV VGDDGYPRCN WLWFRVVVQT FLRSVGGPWR
AEDVESDLAL HEGFLRADSW YSDGDERAFD HYTGWAMHLY PVLWSRMRGA RELTDRSTVD
VQRLDRYLRD HVNLIGADGS PLVQGRSLTY RFAAAAPLWA GALAEVPSTP PGLLRRAASG
IVRHFADRGA PDERGLLTLG WHRAWPRIAQ SYSGPSSPYW AAKGMLGLAL PADHPVWRAV
EEPLPVETGD RLWVATAPGW LVSGTRADGV VRVVNHGADH AVEGAHVGDS PLYARLGYST
ATAPPLSERA WSTPADQSAA LLDAAGRATH RAGMSLLRTG LIDDGRVALG ASRARAHWLA
DAPPARDHGS GRTGEHTDVA LITVVSLLRG PWEVRCVRVD PLPEDPGALD AATALRVGGW
PLAARTPPEV SALPHGLTIA TGDVVSTLLT AEPGDTLEAL SEHDASPLGP HSATPCATGR
ITRSRWRAYA IGLARTTEPP AAPTTGLAAA DLRVTWPDGR TTALDLDEFS P