Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2916 |
Symbol | |
ID | 8327105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3366690 |
End bp | 3367475 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644943442 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003100683 |
Protein GI | 256377023 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.898845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGGTG ACAGCAGCAA TAGCAACAAC GGCAGCAGCA ACAGGCTCAG TGGGCGGACC GCCATCGTCA CGGGGGCGGG CAAGGGGATC GGGGCGGGGA TCGCGCGGCG GTTGGGCGTG GAGGGGGCGA ACGTGGTCGT CGACTACGCG GCCGATCGTG GGGCCGCCGA CGAGGTTGTC ACGGGCATCC GCGCCGAGGG CGGGCGGGCG ATCGCGGTCA GGGCCGATGT CGCCGATCCC GAGCAGGTCG CGGAGTTGTT CTCGGCTGCG CGTGCGGAGT TCGGGATCGT CGACGTGCTG GTCAACAACG CTGGTGCGGT CGTGTTCGGG CCCATCGAGT CCGTGGGGGT GGCGGACTTC CGGCGGCAGG TGGACACGAA CTTCCTCGGG CCGGTGCTGA CCACGCAGGC GTTCGCCGCT CAGCCGGACC TGGCGGGTGG GGTCATCGTG AACGTGTCCA CCGCGGGCAC CATCGGGCTC CCGCCGCACG CCTCGGTGTA CGTGGCCTCC AAGAGCGCGC TGGAGGCGTT CACCGTGGTG TCCGCCAAGG AGTTGGGGCC GCGCGGCATC CGGGTGCTCG GGATCGCGCC CGGCGCCTCC GACACCGACG GGACGCGTGC GCTCGGGTTC GTGGGATCGG AGCAGGCTGT CGCGACCGCC GCGCAGAACC CGTTGGGGCG CATCGGGGTT CCGGACGACT ACGCGCCGGT CGTGGCGTTC CTGGTGTCCG ACGAGGCCCG GTGGATCACC GGTGACGTGC TGCTGGTGTC GGGTGGGCAG CGGTGA
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Protein sequence | MSGDSSNSNN GSSNRLSGRT AIVTGAGKGI GAGIARRLGV EGANVVVDYA ADRGAADEVV TGIRAEGGRA IAVRADVADP EQVAELFSAA RAEFGIVDVL VNNAGAVVFG PIESVGVADF RRQVDTNFLG PVLTTQAFAA QPDLAGGVIV NVSTAGTIGL PPHASVYVAS KSALEAFTVV SAKELGPRGI RVLGIAPGAS DTDGTRALGF VGSEQAVATA AQNPLGRIGV PDDYAPVVAF LVSDEARWIT GDVLLVSGGQ R
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