Gene Amir_2911 details

Gene Information

• Locus tag: Amir_2911
• ID: 8327100
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 3361009
• End bp: 3362985
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 644943438
• Product: protein serine/threonine phosphatase
• Protein accession: YP_003100679
• Protein GI: 256377019
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2208] Serine phosphatase RsbU, regulator of sigma subunit

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCTGCGA ACCCGTCGAC CCCCTGGTCG ACCCGGCTGC ACGCGCTGTG GCGGTCGGCG 
TCGGACGCCA TGAGCACCAA GGGGTTCTCC GAGGAGCTGT ACTTCGGCCT GCTGTCGCTG 
CCCGGCGCGT GCGGTCTGAT CGGGGCCCGG TTCGGACTGC GCGGCGAGGT GCAGATCGTG 
CGGTGGGCGG ACCACGACGG GCTGGTGACC TCGCCGGTCG GGCTCGCCGA GCAGCTCCTC 
GCCTGGACCG CCGCGCACCC CGAGCGGCCG ACCGAGAGCG TGCTGACGCC CCTGGACGAG 
CTGCGCGGGC AGTCGGCGGA CCTCGCCGAC CGGGTCGCGG CGACTGGGGC GACGGGGCTG 
CTGGTGACCT GGTTCGAGGT GTCCGAGAAC GAGTGGGGGC TGCTCGGGCT GGCCGTCTCG 
ACGCCGGACG TGCACGCCGC GCCCGCCGAC GCCGTCGGCA TCGACATCGT CACCGCCATC 
CGGCAGGCCA CCGACGTGAT CGTCGCCGCC GACCACCACA TCACCGAGCG CCGCGCCCTC 
GACGACCAGC AGGCCAGGGA TGCGATCCTC GCCGAGGCCT CGCTGCGCAT GGACGCCTCG 
CTCGACATCG AGGACACCCT GCGCGCCGTC GTGCGGATGG CCGTTCCCGG TCTCGCCGAC 
GGGGCCGCGA TCCACGCCGA GCGGGACGGG CGGATGGCGC TGATCGCCGT CGCGCACGTC 
GACGCGCGGC GCGAGCAGCG GCTCGGCGAG CACTTGCGGG CCGGCCGCTG GGCGGGTGGG 
CCGGTGGTGC TGGGGACCGA CAGCTCCTCC TGGGAGGAGG AGACGCGGAT GTCCGGGCTG 
CCCGACGAGG TCGGGCTGGA GCTGATGACC ATCAGCGTGC TGCGGGCGCG CGGCAGGGTC 
GTCGGGATGC TGGCGTTCTT CCACCGGGAC GGGGGGCCGC GCCGCCCGCG CGGGGCGTTC 
CTGCGGGACC TGGCCGGTCG CGCGGCGCTG TCCATCGACA ACGCCACCCT GTACGAGCGG 
CGGCGCCGGG ACGCGCTGTC GCTCCAGCAG CACCTGCTGC CGACCGTGCT GCCGGACGTG 
CCGGGGCTGG AGTTCGCGAC CACCTACAAC GTCGCCGACC ACACCCTGGA GGTCGGCGGC 
GACTTCTACG GGGCGGTCGA CCAGTCCGGC GGGCGGGTCA CCGCGCTCAT CGGCGACGTG 
TGCGGCCGTG GCGCGCCCGC CGCCGCGCTG ACCGGGCTGG CCAGGCACAC CCTGGAGACC 
GTGCTCGCGG AGGGGCGGTC GGCGCAGCAC GCGGTGCGCA CCCTCAACGA CAAGATGCTG 
CGCATAGGGG TCACCCGCTT CCTGACCCTG GCCACGGCGA CGTTCTGGGC GGCCGAGTCC 
GGCTTCCGGG TGCGGACCCT GTCGGCCGGT CACCCGCCGA CGCTGCTGGT GCGCCGCGAC 
GGCGCCGTGC GGGAGAGCCG CAGCACGGGC AGGCTGGTGG GCGTGCTCCC CGACCTGCGC 
CTGCGCACCG CCACCGACGT GCTGCGGCCC GGCGACGCGC TGGTGATGTA CACCGACGGT 
CTGATCGAGG CCCGCGACGA GGAGGGGCGG TTCTTCGGGG ACACCGACCT GGAGCCCACG 
CTCAGCAGGC TGCGCGGCCT GCCGCTGCCG GACCTGGCGT CGTCGCTGAT CGCGGGCAGC 
GGCCGGTACC ACGTCGGGGA CGACGCGGCG GTGCTCGCGA TCCGGTGCAC CGGGGAGCGG 
GCGCTGCGGG CCGAGCTGCC GCCCTCGGCG GCGGGGGACG CGGCGCTGGC GGCGCTGCGG 
GGGCTGCGGG GCGATTCGGC TCCGGCGGAG CTGCCCGAGC GGCTGGTGGC GTTCCTGGCG 
GAGTGCGCGC TGGAGGGCGT GGGCGCGGTG CGGGTGGCCG TGGACGGCGA CGCCGGGTGG 
GCGCGCGTGG AGATCACTGG GGAAGGGCGC GTGGCGTGGG CCGAGCTGAC GGACTGA 

 

Protein sequence

MPANPSTPWS TRLHALWRSA SDAMSTKGFS EELYFGLLSL PGACGLIGAR FGLRGEVQIV 
RWADHDGLVT SPVGLAEQLL AWTAAHPERP TESVLTPLDE LRGQSADLAD RVAATGATGL 
LVTWFEVSEN EWGLLGLAVS TPDVHAAPAD AVGIDIVTAI RQATDVIVAA DHHITERRAL 
DDQQARDAIL AEASLRMDAS LDIEDTLRAV VRMAVPGLAD GAAIHAERDG RMALIAVAHV 
DARREQRLGE HLRAGRWAGG PVVLGTDSSS WEEETRMSGL PDEVGLELMT ISVLRARGRV 
VGMLAFFHRD GGPRRPRGAF LRDLAGRAAL SIDNATLYER RRRDALSLQQ HLLPTVLPDV 
PGLEFATTYN VADHTLEVGG DFYGAVDQSG GRVTALIGDV CGRGAPAAAL TGLARHTLET 
VLAEGRSAQH AVRTLNDKML RIGVTRFLTL ATATFWAAES GFRVRTLSAG HPPTLLVRRD 
GAVRESRSTG RLVGVLPDLR LRTATDVLRP GDALVMYTDG LIEARDEEGR FFGDTDLEPT 
LSRLRGLPLP DLASSLIAGS GRYHVGDDAA VLAIRCTGER ALRAELPPSA AGDAALAALR 
GLRGDSAPAE LPERLVAFLA ECALEGVGAV RVAVDGDAGW ARVEITGEGR VAWAELTD