Gene Amir_2891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2891 
Symbol 
ID8327080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp3334245 
End bp3334955 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content76% 
IMG OID644943423 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100664 
Protein GI256377004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCCCT CCCGCCAGCA CGACGGCCCC GCGCGCAAGG GCGACCGGGC CGCCGAGACG 
CGCGAGGTGA TACTGGCCGC CGCCGAGCGG CTGTTCGCCG AGCGCGGCGT GAGCGCGGTG 
TCCAACCGGC AGGTCGGCGA GGCCGCCGGG CAGGGCAACA ACTTCGCCGT CGGCTACCAC 
TTCGGCAGCC GGGTCGAGCT GGTCCGCGAG ATCGTGCGCC GGCACGCCGA ACCGGTCGAG 
CGGGCCCGCG CCGCGATGCT CGCCGCCGCC GGGGACAGCC TGGACGTGCG GCACTGGGTG 
GACTGCCTCA TCCGCCCGTA CACCGAGCAC CTCGAAGCGC TGGGCAGCCC GAGTTGGTAC 
GCCCGGTTCA GCGCCCAGGT GCTCACCGAC CCGGTCCTGC GCCAGGCCGT GGTCGACGAC 
GCGCTCAGCG GCGGCACGGT GCGCCAGGTC GTCGAGGGCC TGAACCGCTG CCTGCCCGCG 
CTGCCGCTGC CCGTGCACCT GGAGCGCGGC GGCATGGCCC GCACCCTGCT GTCCCACACC 
TGCGCAGAGC GCGAGGCCGC GCTGGCGCGG GGCGAGCCGA CCACCAGGAC CAGCTGGGAC 
GCCACCGCGA CCGGGCTGGT CGACGCGATC GTCGGCCTGT GGCTCGCGCC GGTCACCCCG 
ACCGGCCCGC GCCGCGACCG CCAACCCTCC CCCGATTGGA GTGCCCGATG A
 
Protein sequence
MTPSRQHDGP ARKGDRAAET REVILAAAER LFAERGVSAV SNRQVGEAAG QGNNFAVGYH 
FGSRVELVRE IVRRHAEPVE RARAAMLAAA GDSLDVRHWV DCLIRPYTEH LEALGSPSWY 
ARFSAQVLTD PVLRQAVVDD ALSGGTVRQV VEGLNRCLPA LPLPVHLERG GMARTLLSHT 
CAEREAALAR GEPTTRTSWD ATATGLVDAI VGLWLAPVTP TGPRRDRQPS PDWSAR