Gene Amir_2889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2889 
Symbol 
ID8327078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp3332639 
End bp3333322 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content76% 
IMG OID644943421 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100662 
Protein GI256377002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGCGGC TCCACAACGA GACCACGCGC GCCCGCATCC TGGACACCGC CGAGCGGCTG 
TTCGCCGAGC GCGGCCTGCA CGCGGTGTCC AACCGGCAGG TCAGCGCGGC GGCCGGGCAG 
GGCAACAACG CGGCCGTCGG GTACCACTTC GGGACCAAGC ACGACCTGGT CAGGGCGATC 
GTCCGGCGGC ACGGCCTGCC CGTGGAGGCG CTGCGGGCGG ACATGGTCGC CCGCGCCGGG 
GACTCGCCGG TGCTGCGCGA CTGGGTCGAC TGCCTGGTGC GGCCGGTCAC CGCGCACCTC 
GCCGACCTGG CCGCGCGCGC CGACGTCGTG GCCCCCGGCG GGATCACCTG GTACGCGCGG 
TTCGTCGCGC AGGTGGTGAC CGATCCGGCG CTGCGGCTGG TCGCCGCCGC CGAGGTCATG 
ACCACGCCGG GGATGGGGGT CGTGCTGGAG CGGCTGCGCG CGCACCTGCC CCCGGAGGTG 
GCGCCGGAGG TGCGGTTCGG GCGGGAGCGG ATGGTGTGGC ACCTCATCGT GCAGGTGTGC 
GCAGAGCGGG AGCGTGCGCT GGCCGAGGGG GTGGCGACGC CGCGCGACAC GTGGGACGGT 
GCGGCGCGCG GTTTGGTGGA CGCGATCACC GGGCTGTGGA CCGCACCGGA CAACACGGTG 
GGGGAGCGGG TCGGGCGCGG GTAG
 
Protein sequence
MRRLHNETTR ARILDTAERL FAERGLHAVS NRQVSAAAGQ GNNAAVGYHF GTKHDLVRAI 
VRRHGLPVEA LRADMVARAG DSPVLRDWVD CLVRPVTAHL ADLAARADVV APGGITWYAR 
FVAQVVTDPA LRLVAAAEVM TTPGMGVVLE RLRAHLPPEV APEVRFGRER MVWHLIVQVC 
AERERALAEG VATPRDTWDG AARGLVDAIT GLWTAPDNTV GERVGRG