Gene Amir_2874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2874 
Symbol 
ID8327063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3316506 
End bp3317588 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content74% 
IMG OID644943407 
Producttransport system permease protein 
Protein accessionYP_003100648 
Protein GI256376988 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACCA CCGAGACCCG TTCCGCCGCA ACGGAAACGC TCCCCGAACG GCCCGGCGGG 
CTCCGCGTCG TGGCCCTGTT CACCGGCCTC GCCGCGACCT TCGCCGTCGT CACGCTCGTC
TCCACCGGCA CCGGGCAGCT CGGCGTCCCC GTCTCCGACG TGCTCGCCTC CCTCGCCCAC
CGCGTCGGCC TCGCGCCCGC CCCGCTGGAC CGCTTCACCG ACAGCGCCCT GTGGGCCATC
CGCTTCCCGC GCGTGGTGAT GACCGCGCTC GTCGGCGGTG TCCTGGGCGT CTGCGGCGCG
CTCATGCAGG GCACGTTCGG CAACCCGCTC GCGGAACCGG GCGTCGTCGG CGTCTCCTCG
GGCGCGGCGG TCGGCGCGTG CCTGTCCATC GTCTTTAACT GGACGTTCCT CGGCGCCTTC
ACCACCCCCG GCGTCGCGTT CGTCGCCGGT CTGGCGACAA CTTTCGCCGT CTACGCCCTC
GCGCGCTCCG ACGGCCGCAC CGGTGTGGTG TCGATGATCC TCACCGGGGT CGCGGTCAAC
GCCGTCGCGG GCGCGGCCAT CGCGCTGCTG GTGTTCCTCG GCGACCAGGC CGCGCGCGAG
CAGATCGTGT TCTGGCAGCT GGGTTCGCTC GCCGGGAGCC GCTGGCCGTA CGTCGCGCTG
GTCGCCCCGC TCGTCGTCGT CACCGCGATC GGCGCGCTCG CCGTGGCCCG CAAGCTCGAC
CTGCTCGCGC TCGGCGACCG GCAGGCCCGG CACGTCGGCG TCGACGTGGA ACGCCTGCGG
CTGCTGGTGA TCTGCCTCGT CGCGGTCGGC GTGTCCGCCG CCGTGTCCTA CACCGGGGTG
ATCGGCTTCG TCGGACTGGT CGTGCCGCAC CTGGTGCGCA TGGCGGTCGG GCCGGGCCAC
CGCGTGCTGG TGCCCGCGAG CCTGCTCGGC GGCGCGGTCC TGCTGTCCGC CGCCGACCTG
CTCGCCCGCA CCCTCGTCGC CCACGCCGAC CTGCCCATCG GCATGGTCAC CGCGCTGGTC
GGCGGGCCGT TCTTCTTCTG GCTGCTGCAC CGGACCCGTT CCGCGGAAGG GGGGTGGCTG
TGA
 
Protein sequence
MTTTETRSAA TETLPERPGG LRVVALFTGL AATFAVVTLV STGTGQLGVP VSDVLASLAH 
RVGLAPAPLD RFTDSALWAI RFPRVVMTAL VGGVLGVCGA LMQGTFGNPL AEPGVVGVSS
GAAVGACLSI VFNWTFLGAF TTPGVAFVAG LATTFAVYAL ARSDGRTGVV SMILTGVAVN
AVAGAAIALL VFLGDQAARE QIVFWQLGSL AGSRWPYVAL VAPLVVVTAI GALAVARKLD
LLALGDRQAR HVGVDVERLR LLVICLVAVG VSAAVSYTGV IGFVGLVVPH LVRMAVGPGH
RVLVPASLLG GAVLLSAADL LARTLVAHAD LPIGMVTALV GGPFFFWLLH RTRSAEGGWL