Gene Amir_2853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2853 
Symbol 
ID8327042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3286225 
End bp3287322 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content75% 
IMG OID644943387 
ProductABC transporter related 
Protein accessionYP_003100628 
Protein GI256376968 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.205982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGCG TCCCCATGGC AGCAACCCCG CAGTCCACGA CCGCCAGCTC CGTCGAGATC 
ACCGACGTCA CCCGCCGCTT CGACGGCACG ACCGTGCTGG ACCGGGTGTC GCTGACGATC 
CCGGCGGGCA CCTTCCACTG CCTGCTCGGC CCGTCCGGCT GCGGCAAGAC GACGCTGCTG 
CGGATCGTCG CCGGGCTCGA CGTCCCGGAC GGCGGCCGGG TCGTCATCGG CGGCGTCGAC 
CACACCCGCG CGCCCGCGCA CCGCAGGCCC ACCAACCTGG TGTTCCAGAG CGGCGCGCTG 
TTCCCGCACC TGAGCGTGGC CGAGAACGTC GCGTTCGGGC TGCGCTCGGG CCCGGACCGG 
TTGCGGGACA AGGCCGAGGT CCGCAGGCGG GTGGGCGACA TCCTGGACCT GGTGGCGATG 
GCCGAGTTCG CGGGCCGCTC CCCCGCCACG CTCTCCGGCG GGCAGCGGCA GCGGGTCGCG 
ATCGCCCGCT CGCTCGTGCT CAAGCCGGAC GTGCTGCTGC TCGACGAGCC GCTGAGCGCG 
CTGGACCTGG CGCTGCAGCT GCGGATGCGG CGCGAGCTGC GCCGGTGGCA GCAGGAGACC 
GGCACGACGT TCGTGTGCGT GACGCACAAC CAGGCCGAGG CGATGGAGAT CGCCGACGAG 
ATCGCGGTCA TGAACCGGGG CGTGGTGGAG CAGAGCGGCG GCGCCCGCGA GCTGTACGCG 
GCGCCGCGCA GCCGGTTCGT GGCCGGGTTC ATCGGCGAGA ACAACGTGTT CGACACCGAC 
GGCTCGACCG CCCCCGAGGT GGACGGGCTG CGGTTCGCGG GCGTGGACGC GACCGGGTTC 
GACGCGCTGG CGGTGCGGCC CGAGTCGCTG CGGCTGGTCG AGCCCGACTC GCCGGACGCG 
CGCGGCACCG GGCACGTGAG CACCACCGGG TTCACCGGGC GCAGCCTGCG GGTCACCGTC 
GTCACGGGCA CCGGCCGGGA GCTGCTGGTC GAGCTGCCGC CGGGCGAGAG CTCGGCGCGG 
CCCGGCGAGC TGGTCGGCGT GGGCTTCGCG GCGGGCGACG TGCTGCGGCT GCGCGACGAG 
CAGGGCGCGG CCGGGTGA
 
Protein sequence
MTGVPMAATP QSTTASSVEI TDVTRRFDGT TVLDRVSLTI PAGTFHCLLG PSGCGKTTLL 
RIVAGLDVPD GGRVVIGGVD HTRAPAHRRP TNLVFQSGAL FPHLSVAENV AFGLRSGPDR 
LRDKAEVRRR VGDILDLVAM AEFAGRSPAT LSGGQRQRVA IARSLVLKPD VLLLDEPLSA 
LDLALQLRMR RELRRWQQET GTTFVCVTHN QAEAMEIADE IAVMNRGVVE QSGGARELYA 
APRSRFVAGF IGENNVFDTD GSTAPEVDGL RFAGVDATGF DALAVRPESL RLVEPDSPDA 
RGTGHVSTTG FTGRSLRVTV VTGTGRELLV ELPPGESSAR PGELVGVGFA AGDVLRLRDE 
QGAAG