| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2850 |
|---|
| Symbol | |
|---|
| ID | 8327039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 3282502 |
|---|
| End bp | 3284574 |
|---|
| Gene Length | 2073 bp |
|---|
| Protein Length | 690 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644943384 |
|---|
| Product | 5-oxoprolinase (ATP-hydrolyzing) |
|---|
| Protein accession | YP_003100625 |
|---|
| Protein GI | 256376965 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG AGCCCACCCG CCGCTACCGC CTCGGCGTCG ACGTCGGCGG CACGTTCACC
GACGTCGTCC TCGCCGACTC GGCCACCGGC GAGCTGATCA CCGACAAGGT GCCCTCCGAC
GCGGCGCGGC CCGCGCGGGC CGTCGTGGCG GGCGTGCTCG GCGTGCTGGA GCGCGCAGGC
GTCTCGCCCG CGCAGGTCGA GCACTTCTCG CACGGCCAGA CGTTCGCGCT CAACACCGTG
CTCCAGCGCT CCGGCGCGCG GGTCGGCCTG CTGGTCACCG CCGGGTTCCC GGACCTGCTG
GCGATCGGGC GGCTGCGCCT GGACGACCCG ATCGACATGT TCGCCGAACC CGCGAGGCCG
CTGGTGGACC AGCGCGACGT GCGGGAGATC CGGCAGCGGC ACCGCGCGGA CGGCGCCGTC
GAGCGCGAGC TGGACCCGGC GGAAGTCGTT GCGGCGGTAC GGGATCTGGT CGCGGACGGC
GTGGAGGCGG TCGCGGTCGC CTTCCTGCAC TCGCACAAGC ACCCCGAGCA CGAGCAGCGT
GCGGCTGCGG CGATCGCCGA GGCGTTCCCG GACCTGCCGG TGGCCTGCTC GGCGGCGCTG
TGGCCGGAGG AGAAGGAGTT CGAGCGCGCC ACCGTGGCGG TGCTGGCCGC GCACGTCGGG
CGCGCGCTCG GCGGCTACCT GGCGCACCTG TCGACGGCGC TGCGCGAGGC CGGTCTGGTG
TGCCCGCTGC ACATCACCCG CTCCAACGGC GGGGTCGCCT CGATCGACCA CGAGCCGGAC
CAGGTGCTGC GGGCGGCCGT GGAGACCCTG CTGTCGGGTC CGGCGAGCGG GGTGGCCGGG
GTGGTGCGGC TGGCCGCCGA CACCGGGCTG CGCGACGTGG TCACCATGGA CATGGGCGGC
ACGAGCGTGG ACTGCGCGGT GGTGCGCGGG GAGATCCCGT ACTCCACCGA GAGCGTCATC
GGCGAGTTCC CGCTGATCAT CCCGTCGGTC GAGGTGTCCT CGATCGGCGC GGGCGGCGGG
TCGGTGGTGC GGGTGGACCG GGCCGGGGTG CTCAAGGTCG GGCCGCGCAG CGCGGGCGCC
CGTCCGGGAC CGGCCTGCTA CGGGCGCGGT GGCGCCGAGC CCACGCTCAC CGACGCGTAC
GTGCTGTGCG GCTACCTGGA CCCGGCGGAC TTCGCGGCGG GCGCGCTGAC CATCGACGTG
GGCGCGGCGC GCGCGGCCAT GGCCCCGGTC GCGGAAGCGC TCGGGCTGGG CGTGGAGCAG
GCCGCCGAGG CCGCGGTCTC CGTCGCGACA GCGATGATGC ACGCCCAACT GGTGCCGCTG
TGCGCGCAGC ACGGGGTGGA CCCGTCCGCG CTGACCATGG TCGCCTACGG CGGCGCGGGA
CCGGTGCAGG CGGCGCTGCT GGCGCGGGCG CTCAACGTCG CCGAGGTCGT CGTCCCGGCC
TCCCCCGGCA CGCTGTGCGC GTACGGCGCG CTGGCCACCG ACATGCGCGT GGACCTGGTC
GCGCCGATCG GGGGCGCCAC CGACGACGCC GAGCTGCGGA ACACCTGGGA CGGCCTGGAG
GCCCGCGCGC TGGCCTGGTA CGGCGAGCAG GACCACGGGC TGCACCAGGA CGTCCGGGTC
ACGCGCTGGG CGGACGTGCA GCTGGTGGGC CAGTCGTTCA CGCTCCCCGT GTCGCTGCCC
GAGGACGCCG AGCCCGGTGT TCCCGCGCTG CGCGAGGGTT TCGCCGAGGC CTACCGGCGC
GCCTACGCGG TCGACCCCGG TCCCGGCGAG CTGGACGTGC GCAGCGTGCG CGTGGTGCTG
GCCGCCGCCG CCGAGCTGCC GCGCGCCCCG TGGCGGGCCA GCGGGGACGC GGAGTCGTTG
CCGCACACCG TGATCGAGGA CGGCGTGGCC GTGCCCGCGC TCGTGCACCG CAGGAACTCG
TTGGCAGCCG GGGCCGAACT CGTCGGTCCC GCGGTGGTGT CCGCGCCGGA CACCACGATC
TTCGTGCCGT CCGGGTGCCG CGCCGTCGTC GACGGGCTGG GCAACCTGCG GATCGCCGTC
ACCCCCGCCG AGAGGAAGGC CGCCCGTGCG TAG
|
|---|
| Protein sequence | MTTEPTRRYR LGVDVGGTFT DVVLADSATG ELITDKVPSD AARPARAVVA GVLGVLERAG
VSPAQVEHFS HGQTFALNTV LQRSGARVGL LVTAGFPDLL AIGRLRLDDP IDMFAEPARP
LVDQRDVREI RQRHRADGAV ERELDPAEVV AAVRDLVADG VEAVAVAFLH SHKHPEHEQR
AAAAIAEAFP DLPVACSAAL WPEEKEFERA TVAVLAAHVG RALGGYLAHL STALREAGLV
CPLHITRSNG GVASIDHEPD QVLRAAVETL LSGPASGVAG VVRLAADTGL RDVVTMDMGG
TSVDCAVVRG EIPYSTESVI GEFPLIIPSV EVSSIGAGGG SVVRVDRAGV LKVGPRSAGA
RPGPACYGRG GAEPTLTDAY VLCGYLDPAD FAAGALTIDV GAARAAMAPV AEALGLGVEQ
AAEAAVSVAT AMMHAQLVPL CAQHGVDPSA LTMVAYGGAG PVQAALLARA LNVAEVVVPA
SPGTLCAYGA LATDMRVDLV APIGGATDDA ELRNTWDGLE ARALAWYGEQ DHGLHQDVRV
TRWADVQLVG QSFTLPVSLP EDAEPGVPAL REGFAEAYRR AYAVDPGPGE LDVRSVRVVL
AAAAELPRAP WRASGDAESL PHTVIEDGVA VPALVHRRNS LAAGAELVGP AVVSAPDTTI
FVPSGCRAVV DGLGNLRIAV TPAERKAARA
|
|---|
| |