| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2833 |
|---|
| Symbol | |
|---|
| ID | 8327022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3261825 |
|---|
| End bp | 3262772 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644943367 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003100608 |
|---|
| Protein GI | 256376948 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCCA CGACCACCCG ACCCGCCCCG GTGGCGGGCG CGCGCGAACC GGACCCGCCA
CCGCGCCGCC ACCGCGCGCG CAGGCTCCGC GCGCTCACCG GGATCGCCTA CGCCACACCG
CTCGCGGTGG TGGTGGCGGT GTTCTTCGTC GTCCCGCTCG GCCTGGTGGC GTGGATGTCA
CTGCACCGCT GGCCGCTGCT CGGGAAACCC GCGCTGAACG CGCCGGACAA CTACACCCGC
GCCGTCGACA GCGACCTGCT GCGCACCGCC GCCCTGTTCA CCGCCAAGTA CACGGTGATC
ACCACGGTGC TGCTGTTCGT CGTCGCCTTC GGCCTGGCCC TGCTGGTGCA GCAGCGCAGG
CGCGGCGTCG GGTTCTTCCG CACCGCCTAC TACCTGCCCA TGGCCGTCGG CTTCGCCAGC
GCCTCCCTGC TGTTCCTGGG GCTGCTCAGC GACGAGATCG GCCCGGTCGA CGACCTGCTG
TCGTGGCTGG GCCTGCTGGA CGGGCACGTG TCGTGGACCA GCGGCAGCCC GGAGTCCGCG
CTCGGCTCGG CGGTCCTGCT GGTGCTGTGG CGCTTCGCCG GGTTCACCAT GCTGATCCTG
CTCACCGGGC TCCAGGCCAT CCCGGTCGAC GTCTACGAGG CCGCCCGCGT CGACGGGGCC
ACCCGCTGGC AGGCGTTCCG GGGCATCACG CTGCCGCTCA TGCGGCCCAC CATCGCGCTG
GTGCTCACGA TCCTGGTCAC CGGCTCGCTG CTGGCGTTCG ACCAGTTCTG GATCCTCACC
AGGGGCGGCC CGGACAACAG CACCACCTCG GTGGTCATGG TCATCTACCG GGAGGCGTTC
GTGCGCTTCG ACCTCGGCTC GGCCGCGGGC ACCTCCGTCG TCCTGCTCCT CGCGCTCGTC
GCGGTGAGCG CCGTCCAGCT CGGCGTCCTG CGCCGCCGGT CGACCTGA
|
|---|
| Protein sequence | MTATTTRPAP VAGAREPDPP PRRHRARRLR ALTGIAYATP LAVVVAVFFV VPLGLVAWMS
LHRWPLLGKP ALNAPDNYTR AVDSDLLRTA ALFTAKYTVI TTVLLFVVAF GLALLVQQRR
RGVGFFRTAY YLPMAVGFAS ASLLFLGLLS DEIGPVDDLL SWLGLLDGHV SWTSGSPESA
LGSAVLLVLW RFAGFTMLIL LTGLQAIPVD VYEAARVDGA TRWQAFRGIT LPLMRPTIAL
VLTILVTGSL LAFDQFWILT RGGPDNSTTS VVMVIYREAF VRFDLGSAAG TSVVLLLALV
AVSAVQLGVL RRRST
|
|---|
| |