Gene Amir_2831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2831 
Symbol 
ID8327020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3258637 
End bp3260526 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content75% 
IMG OID644943365 
Productprotein of unknown function DUF1680 
Protein accessionYP_003100606 
Protein GI256376946 
COG category[S] Function unknown 
COG ID[COG3533] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTCA CGTCGCCGGA CACCACCGTG GTCGGAGGTC GACCCGTCGT GCCCTCGCGC 
GGCGCGCTGC GACCGCTCGG GCTCGCGGAG GTGCGGCTCG CGGGCGGCTT CTGGGGAACG
CGCCAGCGGG TCAACGCGGA GGCCACCCTG CCGCACGCCC GCGCCTGGAT GGACCGCCTC
GGCTGGACCG GCAACCTCAC CGCCGCCACC CGCTCGCCCG ACCGCAGGGG GCGCGAGTTC
TCCGACTCCG AGGTGCACAA GCTCCTGGAG GCCATGTCCT GGGAGGCGGG CCGCGCGCCG
AACCCCGAGC TGGAGAAGCA GATCACCGAG CTCACCTCGG CGATCGCCGC CGCGCAGTCC
CCGGACGGCT ACCTCGGCAC CGCGTTCGGC GGCCCCGGCC AGCGCCCCCG CTACAGCGAC
CTCGCCTGGG GCCACGAGCT GTACTGCGCC GGGCACTTCC TCCAGGCCGC GGTGGCGCGC
GCCCGCACGG CGGGGGAGGA CGACGAGCTG CTGCGAGTGG CCAGGGGCGT CGCCGACCAC
GTGTGCGCCG AGTTCGCCAC CAACCCCGGC GTGTGCGGCC ACCCCGAGAT CGAGATGGCG
CTGGTGGAGC TGCACCGCGT CACCGGCGAG GCCCGCTACC TCGACCAGGC CGCCGAGTTC
GTGGCCCGCC GCGGTCGCCG AACCCTGCCG CCGCACCAGT TCGGCTGGTC CTACTTCAGC
GACGAGACCC CGGTCAGGGA CAACCCGGTC ATGCACGGCC ACGCCGTGCG CGCCCTGTAC
CTGGCCTGCG GCGCGGTCGA CGTCGCCGTG GAGACCGGCG ACCGCGCGCT GCTCGACGCG
GTCGCCGCCC AGTTCGACCG CACCCTCGCC CGCCGCACCT ACCTGACCGG CGGCATGGGC
TCGCGGCACA CCGACGAGGC GTTCGGCGAC GACTTCGTCC TCCCGGCCGA CCGCGCCTAC
TCCGAGACCT GCGCGGGCGT CGCCACGATC ATGCTGGCCT GGCGGCTGCT GCTGGCCACC
GGCGACGGCC GCTACGACGA CGTGATCGAG CGCGTCCTCT ACAACGTGGT GGCCACCGCG
ATCGGCGACG ACGGCCGCTC CTTCTTCTAC GCCAACACCC TGCACCAGCG CACCCGCACC
GCCGAGCTGC CGGACGACCG CGAGCAGCTC GGCTTCGGCG GCGGTCCGCG CGCGCCCTGG
TTCGAGGTGT CCTGCTGCCT GCCCAACCTC GCCCGCCTGC TCGCGTCCCT GGCCTGCTAC
ACCGCGACCG CCGACGACAC GGGCGTGCGG CTGCACCAGT ACGCCGACGC CGACCTCGCC
ACCACCCTGT CCGACGGGCG CGAGGTGGGG CTGGCGGTGC GCACCCGCTA CCCCGACGAC
GGCGTGATCA CCGTGCGCGT CACCAAGACC GACGACCGCC CGTGGTCGCT CACGCTGCGC
GTGCCCGGCT GGGCCGAGGG CGCGGTGCTG CACACCACCT ACGGCCGCCA CCCGGCGCCG
GTCGGCGACG TGGTGGTGCA CCGGAACTTC GTGGTGGGCG AGGAGATCCG CCTGGAACTG
CCGGTGCGGC CCCGCTTCAC CGCCGCCGAC CCGCGCGTCG ACGCGGTCCG GGGCTGCGTC
GCCGTCGAGC GCGGACCCGT CGTCTACTGC GCGGAGTCCA CCGCGCTCGA CCTGGACCCG
CTGCGCGTCG ACCCCACCTC CCGCCCGGTC GACGGACCGG AAGGCGTTGT GGTGCAAGCG
CTCCTCGGCA CCCCGCCGGA CCGGCCGTGG CCGTACGGCG CCCCCGTCGA ACCACCGGGT
GGCGCGCACA CCCCGCTCAC CCTGGTGCCG TACCACCGCT GGGCCCGAGG CGGCCCGTCC
ACCATGCGCG TCTGGCTGCC CCAAGGCTGA
 
Protein sequence
MTLTSPDTTV VGGRPVVPSR GALRPLGLAE VRLAGGFWGT RQRVNAEATL PHARAWMDRL 
GWTGNLTAAT RSPDRRGREF SDSEVHKLLE AMSWEAGRAP NPELEKQITE LTSAIAAAQS
PDGYLGTAFG GPGQRPRYSD LAWGHELYCA GHFLQAAVAR ARTAGEDDEL LRVARGVADH
VCAEFATNPG VCGHPEIEMA LVELHRVTGE ARYLDQAAEF VARRGRRTLP PHQFGWSYFS
DETPVRDNPV MHGHAVRALY LACGAVDVAV ETGDRALLDA VAAQFDRTLA RRTYLTGGMG
SRHTDEAFGD DFVLPADRAY SETCAGVATI MLAWRLLLAT GDGRYDDVIE RVLYNVVATA
IGDDGRSFFY ANTLHQRTRT AELPDDREQL GFGGGPRAPW FEVSCCLPNL ARLLASLACY
TATADDTGVR LHQYADADLA TTLSDGREVG LAVRTRYPDD GVITVRVTKT DDRPWSLTLR
VPGWAEGAVL HTTYGRHPAP VGDVVVHRNF VVGEEIRLEL PVRPRFTAAD PRVDAVRGCV
AVERGPVVYC AESTALDLDP LRVDPTSRPV DGPEGVVVQA LLGTPPDRPW PYGAPVEPPG
GAHTPLTLVP YHRWARGGPS TMRVWLPQG