| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2825 |
|---|
| Symbol | |
|---|
| ID | 8327014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3253401 |
|---|
| End bp | 3254162 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644943360 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_003100601 |
|---|
| Protein GI | 256376941 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTG AGCCGAGCCC GCCGGGATTC CCGCGGAGCA CCTGGGACCT GTTCCGCGTC
CAGCTGTCCA ACTGGCGCTG GTCGTGGCCG CAGATGGTGC TCACCGGGAT GCTCGCGCCC
GTGGTCACCC TGGGCGCGCT GGGCACGTTC GCCAGGGGAA GCGGGGAGGT CGCGACCGGG
TACGTGCTCA CCGGGAGCAT GACGATGGCG CTGCTGTTCG AGACGCAGAA CAAGGTGGCG
GCGAACTTCG CGTTCCTGCG GCACACCGGG GCGTTCGACT TCTACGCGTC GCTGCCGGTG
CGGCGGGAGG CGCTGGTGCT GGCCTCGGTG GCGGCGTTCG GGCTGCTGGC GCTGCCCGCG
CTGGTGCTCA CGGCCGTGCT GGGGGTGCTG GTGCTGGACG TGCGGTTGTC GGTGTCGCCG
CTGGTGGTCC CGGCCGCGGT GCTGGCGGTG CTGCCGTTCG CGGGGCTCGG GGCGTGGATC
GGCAGCCGGT CGCGGGCGCT GGAGGAGGCG TCGTCGGTGA GCCTGGCGGT GACGCTGGTG
CTGGTCGCGC TCGGCCCGGT CACCATCCCG CCCGAACTGC TGCCGGACTG GCTGGTGCTG
GTGGGGCGGC TGAACCCGGC GACGTACGCC TCGTCCCTGC TGCGGCACAG CCTGCTCGGG
CCGGTCGGGG CCGGGGCGCT GGTCGACGTC GGGGTGCTCG TGGGGTTCGC GGTCCTGGTC
TGGCTGCTGA CGCGGCGGCA CGTGCGCTGG CGCGACGCCT AG
|
|---|
| Protein sequence | MSAEPSPPGF PRSTWDLFRV QLSNWRWSWP QMVLTGMLAP VVTLGALGTF ARGSGEVATG
YVLTGSMTMA LLFETQNKVA ANFAFLRHTG AFDFYASLPV RREALVLASV AAFGLLALPA
LVLTAVLGVL VLDVRLSVSP LVVPAAVLAV LPFAGLGAWI GSRSRALEEA SSVSLAVTLV
LVALGPVTIP PELLPDWLVL VGRLNPATYA SSLLRHSLLG PVGAGALVDV GVLVGFAVLV
WLLTRRHVRW RDA
|
|---|
| |