Gene Amir_2804 details

Gene Information

• Locus tag: Amir_2804
• ID: 8326993
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 3227795
• End bp: 3228592
• Gene Length: 798 bp
• Protein Length: 265 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 644943340
• Product: GAF domain protein
• Protein accession: YP_003100581
• Protein GI: 256376921

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.546836
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGATCA CCCCGCAGGA AAGCGCCCCG CAGGAAAGCG CCCCGCAGGA GCGCGCCGAA 
GCAGCGAGCG ACCGGGAAGT GCGGGTGGCG CGCGCGTTCG TGCGCCTGGC CGACACGCTC 
GTCGCGGACT TCGACGTCGC CGAGTTCCTC CACATGCTCA CCGAGCAGTG CGTCGAACTG 
CTCGACTCGA CGGCCGCAGG CGTGGTGCTG GTCGACCGGT GGTCGGTGCC GCACGTGACC 
GCGAGCTCGT CGCAGGAGGC GGAGCTGCTG GAGCTGTTCG CCGTGCAGGC CGACGACGGC 
CCCTGCATCG ACTGCGTCCG CTCCCAGACC CCCGTCTCCT GCCCCGACCT GCGCGAGGCC 
ACCACCCGCT GGCCCCGCTT CACCGCGGCA GCCCACGAAT GCGGCTTCCG CTCCGCCCAC 
GCCCTGCCCC TGCGCCTGCG CGAACACGCC GTAGGCGCGA TCACCCTGCT CAACACCCAA 
CCCGGCGACC TGAGCCAGGA CGTGCTCCAA CTCGGCCAGG CCCTCGCCGA CGTCGCCACC 
ATCGGCATCC TGCAACAACG CGCCATCAAG CACGCCGACC AGCTCAGCGG CCAACTCCAG 
ACGGCGCTCG GCAGCAGGAT CGTGATCGAG CAGGCCAAGG GAATACTGGC GGTCTGGGGC 
GAGATCCCGC TCGACGTGGC GTTCAGCAGG CTGCGCGGCT ACGCGCGCGC GCACCACCAC 
CGCCTCACCG ACCTGGCCCA CGCCGTCACC ACCGGCGTGG CCGACAGGGC TGCGATCCTC 
GCCCACCGGG CGCGCTGA 

 

Protein sequence

MVITPQESAP QESAPQERAE AASDREVRVA RAFVRLADTL VADFDVAEFL HMLTEQCVEL 
LDSTAAGVVL VDRWSVPHVT ASSSQEAELL ELFAVQADDG PCIDCVRSQT PVSCPDLREA 
TTRWPRFTAA AHECGFRSAH ALPLRLREHA VGAITLLNTQ PGDLSQDVLQ LGQALADVAT 
IGILQQRAIK HADQLSGQLQ TALGSRIVIE QAKGILAVWG EIPLDVAFSR LRGYARAHHH 
RLTDLAHAVT TGVADRAAIL AHRAR