| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2790 |
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| Symbol | |
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| ID | 8326979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 3215811 |
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| End bp | 3218000 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644943327 |
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| Product | hypothetical protein |
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| Protein accession | YP_003100568 |
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| Protein GI | 256376908 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00546434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGTC TCCTCTACCG GCTCGGCGTC GGCTCGCACC GACGACGGCT CGCCGTAGTC
CTGTTGTGGC TGGTGGTGCT GCTCGGCACC GGCGCGGGCG CGCTGACCCT CTCGGGCACC
ACCGCCAACT CGTTCTCCAT CCCCGGCCAG GAGTCCACGA CCGCGCTGGA CAAGATCTCC
GAGGAGTTCG GCTCCAGCGG TGGCGCGACC GCGCGCGTGG TGGTCAAGGC CCCGGACGGC
CAGACGCTGA CCACGCCGGA GAACGCCCAG CTGATCGCGG GCCTGGTGCA GGATCTGTCC
GAACTGGACG GTGTCGCCTC GGCGAGCAAC CCGCTCGACC CGCAGGCGCC CGCGGTGAAC
CAGCAGCAGG ACACCGCGTA CAGCACGGTC ACCTACAGCG CCAAGGTCGG TGACATCACC
CAGGAGCAGA AGGACGCGCT GTTCAAGGCC GTCGAGGACG GCCGCACCGG CGGGCTGACC
GTGGAGGCCG CGGGCGAGGC CACCCAGTCG CCGCCGCACA TCGGCGGCGT CGCCGAGGCG
CTCGGCGTGA TCATCGCGCT GGTGATCCTG GCCGTCACGT ACGGCTCGCT CGTCACGGCG
GGCATGAACC TGCTGACCGC GAGCGTCGGC GTGGGCATCG GCGCGCTCGG CGTCATGATC
GCCACCGGGT TCATGGACCT GCAGTCCACC ACCCCGATCC TGGCGTCCAT GCTGGGCCTG
GCCGTGGGCA TCGACTACGC GCTGTTCATC ATCAACCGCT ACCGGCAGGA GCTGCGGCAC
GGGCGCGAGG TCGGCGACGC CATCGGCATC GCCGTGGGCA CCGCCGGTTC CGCCGTGGTC
ACCGCGGGCA TCACCGTCGT GATCGCGCTC GCCGGCCTGA CCGTCGCGGG CATCCCGTTC
CTGACCCAGA TGGGCGTGGC CGCCGCCGCG ACGATCGTGG TGTCGGTGCT GATCGCGATC
ACGCTCGTCC CCGCGGTGCT GGGCTTCCTG GGGCTGAAGG CGTTGCCGCG CAAGCAGCGC
GAGGCCGTGC GGCGCGGGGA GGTCGGCGAG ACCGAGGAGC AGCACGAGCG CGGGTTCTTC
CGGGGCTGGG TCAACGGCGT CACCAAGCAG CGGGTCGCCG CGCTGCTGCT GGCCGTGATC
GGCCTCGGCC TGGTGTCGGT GCCCGCCGCG TCGATGACCA CGACGCTGGT GCCGCGCCCG
GTGGTCGACT CCACGCAGGA GCGCGCCGAG AAGATCCTGG CCGACGGGTT CGGCGCGGGC
TTCAACGGGC CGCTGATCGT GCTGTTCGAG GGCGGGAACC CGGCGCAGGC CGCCGCTGCC
GCCGTCGCGG ACATCCAGGG GCTGGACGAC GTCGCGATGG TCGCGCCGCC GATCCCCGAC
GCCGACGGCA CGGCGGCGAT GCTGACCGTG ATCCCGAAGT CCGGGCCCGC CTCGCAGGAG
ACCGAGAAGC TCGTCGAGGA CCTGCGGGCG CAGCTCGCGG ACGTCGAGGG CAGCACGACC
TACGTGACCG GGTCGACGGC GGTGAGCGTG GACGTGGCGG TGACGCTGGA CAAGGCGCTG
CCGGTGTACC TGGTGCTCGT GGTCGGCCTG GCGCTGCTGC TGCTGGTGCT GGTGTTCCGG
TCGATCCTGG TGCCGCTGGT CGGCGTGCTG GGCTTCCTGC TCACGATCGG CGCGTCGCTG
GGCGCGACGG TCGCGGTGTT CGAGTGGGGC TGGCTGGCGG ACGCGGTCAA CCTGGACGGC
ACCGGGCCGC TGATCAGCCT CACGCCGATC ATCGTGATCG GCATCCTGTT CGGACTCGCG
ATGGACTACC AGGTGTTCCT GGTGTCGCGG ATGCACGAGG CGCACGCCCA CGGCATCGCG
CCGCGCGACG CGATCCGCAC CGGCTTCCGC CAGGCCGCGC CGGTGGTCGT GGCGGCTGCG
CTGATCATGT TCTCGGTGTT CGCCGGGTTC GTGCCGTCGG GTGACGCGAC GATGAAGTCG
ATCGCGTTCG CGCTGGCGAT CGGGATCGCG GTGGACGCGT TCGTGGTGCG GATGGTGCTG
GTCCCGGCGG CGCTGGCGCT GCTGGGCAAG GCGGCGTGGT GGCTGCCGTC GTGGCTGCGG
TGGTTGCCGG AGCTGGACGT GGAGGGCGCC GGGCTGGAGC GGGACGGGAA GCTGGAGCCG
GAGAAGCCGC TGGCTGACGT GGCGGGCTGA
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| Protein sequence | MARLLYRLGV GSHRRRLAVV LLWLVVLLGT GAGALTLSGT TANSFSIPGQ ESTTALDKIS
EEFGSSGGAT ARVVVKAPDG QTLTTPENAQ LIAGLVQDLS ELDGVASASN PLDPQAPAVN
QQQDTAYSTV TYSAKVGDIT QEQKDALFKA VEDGRTGGLT VEAAGEATQS PPHIGGVAEA
LGVIIALVIL AVTYGSLVTA GMNLLTASVG VGIGALGVMI ATGFMDLQST TPILASMLGL
AVGIDYALFI INRYRQELRH GREVGDAIGI AVGTAGSAVV TAGITVVIAL AGLTVAGIPF
LTQMGVAAAA TIVVSVLIAI TLVPAVLGFL GLKALPRKQR EAVRRGEVGE TEEQHERGFF
RGWVNGVTKQ RVAALLLAVI GLGLVSVPAA SMTTTLVPRP VVDSTQERAE KILADGFGAG
FNGPLIVLFE GGNPAQAAAA AVADIQGLDD VAMVAPPIPD ADGTAAMLTV IPKSGPASQE
TEKLVEDLRA QLADVEGSTT YVTGSTAVSV DVAVTLDKAL PVYLVLVVGL ALLLLVLVFR
SILVPLVGVL GFLLTIGASL GATVAVFEWG WLADAVNLDG TGPLISLTPI IVIGILFGLA
MDYQVFLVSR MHEAHAHGIA PRDAIRTGFR QAAPVVVAAA LIMFSVFAGF VPSGDATMKS
IAFALAIGIA VDAFVVRMVL VPAALALLGK AAWWLPSWLR WLPELDVEGA GLERDGKLEP
EKPLADVAG
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