Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2774 |
Symbol | |
ID | 8326963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3200007 |
End bp | 3200735 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 80% |
IMG OID | 644943312 |
Product | putative integral membrane protein |
Protein accession | YP_003100553 |
Protein GI | 256376893 |
COG category | [S] Function unknown |
COG ID | [COG5660] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.227897 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACTGCG ACACCTGCCG CGAGGCGCTC TCGGCCCGGC TGGACGGGGA GGCCGCGCCC CTGCCCCCGG CGTGGACGGA CGCGCACCTG GCCAAGTGCC CCGACTGCGC GCGCTGGCGG GGCCGCGCGC AGGCGCTCAC CAGGCTGGTC CGGGTCCGCG AGGCCCCCGC CGTCCCGGAC CTGGCGGCCG AGGTGCTGGC CGACCTGCCG CCCGCGCACG GCGCGCTGCG CCCCCGGCTC GCGCTCGCCG CCGTGGCGCT GGCGCAGCTG TGGCTCGCGC TCGCCCAGCT GCTCACCGGC GCGACCGGCC ACGACGTCAC CGCGGGACAC GGCGCGGAGG GCCTGGCCGG GCACCTGTTC AACGAGGGCG CGGCGTGGAA CCTGGCGCTG GGCGTCGGCC TGCTGGTGGC GGCGGTGAAC GGCAGGCGCG CGTCCGGCCT GCTGCCCACG CTCGGCGGGT TCGTCGTGCT GCTGCTGGGC TTCTCCGCGC ACGACCTGGC CGAGGGCACC GCGACCGCCA CCAGGGTCGC CTCGCACCTG CCGCTCGCCG CGGGCCTGGT GCTGCTGCTC CTCGTCGCGC GGGCGCACCG CGACCACCCG GAGCCCGAGT CCGCCGCCCG CCCCGAACCG CGGCGGGCGC GCACCGCCGA CCACGACGTC CCACCGCCGC GAGCGGACCG CGCGCCCACC CGTCACCTGC GACCGATCGC GCACCGCAGG GCCGCGTGA
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Protein sequence | MDCDTCREAL SARLDGEAAP LPPAWTDAHL AKCPDCARWR GRAQALTRLV RVREAPAVPD LAAEVLADLP PAHGALRPRL ALAAVALAQL WLALAQLLTG ATGHDVTAGH GAEGLAGHLF NEGAAWNLAL GVGLLVAAVN GRRASGLLPT LGGFVVLLLG FSAHDLAEGT ATATRVASHL PLAAGLVLLL LVARAHRDHP EPESAARPEP RRARTADHDV PPPRADRAPT RHLRPIAHRR AA
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