| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2750 |
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| Symbol | |
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| ID | 8326939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3164541 |
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| End bp | 3171884 |
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| Gene Length | 7344 bp |
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| Protein Length | 2447 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644943288 |
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| Product | YD repeat protein |
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| Protein accession | YP_003100529 |
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| Protein GI | 256376869 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCATCGCA GATCAACACC CTGGTTCCAC CACCCCTTCT TCCGCAGATC CATCGCACTG
GGCACCGCCG TCATCCTCGG TGCCGCCCTC GTCCAACCGA CGGCCAACGC CCAGCAGGCC
CCGGTCCAGG CCCAGCTCCA ACCGGGCAAG GCCGAAGACC TCCCACCGCT TCCCAGCCAC
CCCGGTGACG CCGTCACCCC CGAGTGGCCT GCGGGCGACT ACGGGCAGTT GGAGCAGGCC
GCCCCCCGGA TCGCCGACCC CGACGCGCCC GCCCGCAAGG CCGCGGGCGA GCAGGTCGGC
TACGTCGAGG GCGAGTCGAA ACTGGTGGAG CGCAAGCCCA CCACCGACAT CTACGCCAAC
CCCGACGGCA CCAAGGCCGC CAAGCTCTAC CAGGACGTGG TCAACGTTCC CGAGGACGGC
GACGGCGCGC TCGTGCCCGT CGACCTCACG TTGGAGAGCG AAGGCGGCCG CATCAAGCCC
AAGCAGGCCG CAGCCCAGGT CAGCCTGCCC GAGCGCACCG ACGGCGACGC CGCCATCTCC
GTGACCACCC CGGAGGGCGG CCAGCGCGCC TCGCTGGAGT TCGAGGGCCT CGCCGACCGG
GCTGCCGAGA TCGACGGCCA GATCGCCACC TACCGCGACG TCCAGCCCGG CGTCGACCTG
GAGCTGTACT CGATGGCCTC CGGTGCGAAG CACGTGTTCG TGCTGCACCG CGCTGTCGAG
GAGGTCGAGT GGCACTTCAC CCTGGACGTC CCGCCCGGCC ACACCCCCGA GCAGCAGAGC
GACGGCGCGA TCCTGGTCAA GGACGCCGAC GGCGCCGTGA AGTTCGTCGT GGCCGCCCCC
AAGATGTGGG ACGACGTGCG TGACGAGCGC TCCGCGGAGT GGCGCACCGG CCCGGTGACC
CAGCGGCTCG AACGCGCGGG CGACACCTGG AAGGTCGTGC TCGTCGCCGA CCGCGCCTGG
GTCGACGCCC CCGAGCGCAA GTTCCCGATC AAGGTCGATC CCGGCCTGCA CACCCTGTAC
GCGGCCTTTG ACGCTTATGT CTCCGATGCC TTCAAGGACA CGAACTACGA CGTGGACTGG
GAAAGCGGCC TCGGCTACGT CAACAAGGTC GGCTACTGGC CCGGCGCGGG GGAGAACCGC
ACCTACGCGT TCTACGACTT CCTGCCGCAC GTGTGGGGCA AGCAGATCGT GAACGCCACG
TGGAACGCCT ACTGGGTGAA CTCGCACCTG GCCACCCCGA CCAACGTGCG CATCCGGGAC
GTGGCTTGCG ACTGGGGCCG CACCTCGATC ACCTGGAACA ACCAGCCCTG CCTCGGCGCC
GCCACGAAGA ACTCCACCGG CGTCGGCGGC AAGCCCACCA CGATCGACAT CACCGACTGG
GTCGCCTGGT GGGCGGGCGG CGGCGGCAAC TACCGCGGCA TCGCGGTCGA CACCACCGAG
GGGCAGAACG GCTGGAAGAA GATGGCCGCA GCCGAGGCGG GCCCCAGCGG CGGCGCCTCG
GCCGTGATCA TCAGCTACAA CGACCACCCC ACCCAGCCCG CGAACCTCGG CTGCACCGAC
TGCACCCCCC ACAGTCGGGA GGTGCAGCTG CGCGTCAAGA GCGATGACGC CAACAACGAC
AAGCGCATCG TCCAGTACTT CGTCTCCACC GAGACGAACG TCATGGACAC CTACTTCGCG
TCAGGTCAGG CGGAGATCCA GCCGGGCCAG GGCGAAGCCG GCTGGCAGCC GCCGAAGGAA
TCGTTGCGCT GGAACCAGAA GTACTTCTGG CAGGCCCGCG TGCGCGACGA CCACATGCCC
TCCGGTTCGT GGGTGTACTC GTCGGTCTGG AACTTCACCC CGATCAACCA GACCCCGCCG
GTGCCTCCGC AGAACAAGCC CGTCGACCGA GCCGTGGTCT CCACCAAGCA GCCGGTGCTC
GGCGCCGGGG CGGTGACCGA CCCGGACGCC GGTGACGTCG TCCAGTACGA GTTCAGCATC
GCCACCGGCA AGGACGGCCG CACCGGCCTC GTCGCCAAGT CCGGCTGGAT CGACAAGCCC
GAGTGGACCG TGCCGAACGG CGTCCTCAAG GACGGCGTCG GCTACACCTG GACCGTGCGC
AGCCGCGACC GTGACCAGGA CTCCTGGTCC CAGTACGCCG CCGCCCGCCA ACTGCGCCTG
GACATGCGGG TCGGCTCCCA GTCCGTCGTG GCCACGGACA CCACCGGCCC GTTGAGCATC
AACCTCGCCA ACGGCAACCT CAGCACGGGC CTCTCCACGC CGAGGATGAG CACCGTCGGA
GGCGAGGTCG GCCTGAACCT GGCCTACAAC TCACTGCTGG TCGAGGAGTC CGGTCTGGTC
GGCTCCTACT TCACCGGTGA CTCCCGAACC GGCATCCTCG ACACCGAGGA GCCCGTGCTG
GTGCGCACCG ACCCGCAGGT GTCGTTCAAC TGGGGCGACC AGTCCCCGTA CGATCCGGTC
GTGGGGAGGG ACGGCTTCCG CATCCGCTGG CAGGGCTTCC TGAAGGTGCC CACCTCGGGC
TCCTACGCCC TCGGCGGTCA GTACGACGAC GGTCTGCGCG TGTGGATCGG CGACGACAAG
GTCTTCGACC AGTGGACCGA CAACTGCACT TGCGGCGGTC CCGCCAAGTT CGACGGCGCG
GTCGCCAAGC AGCTCAGCGC GGGCGTCGCC TACCCCGTCC GAATCGAGTA CCGCGAGTTC
TCCGGCCCCG CCGACATCGC GCTCTGGGCC CGGCACGGCG ACGGCCAGGC CGTCCCGGTG
CCCGCCTCCT GGTTCACCCC CACCGCGTCC GCGCTGCCAT CCGGTTGGAC TCTGTCCGCC
GACGTGGCCG CGGTGGGCAA CGGCTACACC AAGGCGAGTC TGACCGAGTC CGGCGTCACG
ATCACCGACA GCACCGGTGC CTCACACGCG TACAGCAAGA CCTCCGACGG CGGGTACCGA
CCGCCCGCGG GGGAGTACGG CACACTGTCC CGCGACGAGG GCGGCAAGCT CACCCTCATC
GACACCGATG GCTCCACCCA CGTGTTCGGC GCCTCGGGCC AACTGGAGGC GGTCACCTCG
CCCGCCGACG CCCGAAAGCC CGCAGCGGCG CGCCTGGAGT GGACCCAGTC CGACCTGACC
AGTCCCGTCC CCAGGCTGAC GAAGATCACC GACCCGGTGT CGGGCCGCGC GATCACCCTG
CACTACGCCG GTGACCAGGC GTGCGCGCCC CCTGGCGGCT ACCACCCGAC CCCGCCGGGC
TTCCTGTGCG CGGTCAAGAT GCCCGACGGC GCCACCAGCA ACCTGTTCTA CCTCAACGGA
AGGCTGGGCC GCTTCCAGAA CCCCGGCGGC GAGTACCACG ACTTCGGGTT CAACGAGCAC
CACCTGCTCG ACCAGCTGCG CACCCCGCTG GCGATCGAGT GGATCGTCGC CGACTCCCTG
AAGCGCGACT CGTACGCGCC GAACTACCGC GTCGACTACG ACGGGCCGAC CAGCAGGCGC
GCTGCCAAGC TCTCCTCGCC GGAACCGACC GGCTTCGAGC AGAACCCCAC GCGGCGCGTC
CAGCACACCT ACTCCTACGG CTCCGACTCG ACCGAGGTCG CCATCGTCGG CATGGCCACC
GGTCCCGGTT TCGCGAGGAA GGTCACCCGA GACCTCGGCG GCCGCACCCT GACCGACACC
GACGGCTCCG GGCGCACCAA GCGCCACGAG TGGGCCGAGG ACGACAAGCA GCTCTCGGTC
ACCGACTCGG CGGGCCGCAA GTCCACCACC GTCTACGACG CCAAGGGCAA CCCCACCGAG
TCCTACGGCC CGGCGCCCGC CCGCTGCTTC GGCGGCGACC GCCGTCCGCT GGCCCCGGCC
CCTGAGGGCT GCGACAAGAT CCCCACCAGC CGGACCGGCT ACGACGAGGG CTTCACCGGC
CTGGGCGCCA CCTGGTGGAA CAACCCCTCG TTCTCCGGTG ACGCCACCGC CTACAGCACC
TCCCCGGTGA ACACCGACTG GCGGGCCTCC GCGCCCGTCA CCGACGTCGA CTTCACCTCG
GCGCTCTCCG GCCGCCTGAC CGGCGCGCTG GACGTGCGGA CCGCAGGCTC CTACGAGTTC
TCCACCACCG AGGACGATCC CTCGGACGGC CTGCGCGTCT ACGTCGACGA CAACCTCGTC
CTCGACCGCA CCTACTCCTC CCAGGTCCTC GCCAGCGGCC CCCTCGGCTA CTGGCGGCTG
GGGGAGAACA CCACCACCAT GCGGGACTCC TCAGGGCACG GCCGCGACGG GACCTACTCC
GGTTCCGCCA AGCAGTGGCA GGCCGGAGCG CTCCCGGACG ACCAGAGCAC GTCGGTGGAC
TTCCACGGTG GCCAGGCGCA GGTCGCGCCC GCGCCGTTCG ACCTGGAGGG CGCGCTCACC
CTGGAGGCGT GGGTCAAACC GCGCCCGAAC GACGCCAAGG GCGGCTGGCA GGACATCATC
AGCCGCTGGA ACGGCGGCGA CGACAAGGCG ATGCCCTACG AGTTCACCAT CACCCCCGAG
GGCAAGCTGG AGTTCCGGCA GATCGGCGCG ACACCCGGCA TCCGGCGGAC GGTGTCCGAC
GACTCCGTGT CGCTGAACCA GTGGAACCAC GCCGTCGTCA CGCGCGGCGC CGACAACCAG
ATCACCTTCT ACCTCAACGG GAAGAAGTCC GGCGGCGCCA AGCTCGCGGT TCCGGCCAAG
GTCAATGCCG TCCCGCTGAC CATCGGCAAC CGGCCGGGCG GCGCCACCAC CGATGCCCTC
CTCGACGAGG TCGCGGTGTA CGACCGGGCG CTCACCGAGA AGGAGGTTGC CGGGCATAGC
GGCGCGGCGG GCGCGGTGAA CACGCCCAAG ACCAAGAGCA CCCTGTCCCA GGGCAGTCAC
CGCGTTCGGG TCGAGTACTC GCAGCGCGCG CTCACCGGCA ACCTGACCAG GGAAACCGGC
GCGGCCGCCG TGCTGTGGAA GCGTGACGGC GAGACGGCCA CCACCGTGCC CGCCGACGTC
CTCACCCCCG ACTACGGCCT GACCACCTCG ACCACGACCG CCGACTCGGA CAGCAGGCCC
GACCGCAGGA CCACCACGTC CTACACCGGG GAGGGGCACG ACCCGGCGTA CGGCCTGGTC
ACCTCCACGG CGCTGGACCC CGCAGGCCTG AACCTGGTCA ACGGCACCGG GTACGAGAAG
CCCGGCGACG GCCTGCTGCG CCGGACCACC CGCACGCTGC CCAGCGGCAC GCCGATGGCC
CACACCTACT ACGGCAACAC CGAGACCAGG CCCAATCCCT GTCAGCCGGG GGCTGAGCCG
GTTGTCCAGT CCGGGTTGAG CAAGACCTCG GGCGGGGTGT CCGGCCGGGT CGACGAGCGG
GTCTACGACC TGCGCGGCCG GGTGGTCGCC GAGGCCGCGC CTGGTGGCTG GACCTGCACC
GCGTACGACA GCCGGGGGCG GATGACGAAG ATCGCGCACC CGGCGAGCGG CTCCACGCCG
GCCCGCGTGG TGTCCTACGA CTACGCCGTC GGCGGCGACC CGCTGGCGAC CTCGGTGTCC
GACTCCGCGG GGACCATCAC CACCAGGGTC GACCTGCTGG GCCGGATCGC CTCCTACACC
GACGTCCACG GCCTGACCAC CATCCCGGAG CTGGACCTCG GTGGCCGGGT GGTCCGAGAG
ACCACGAAGG CGCCTGGCCA GGCCGGTGAC CTGCCCGCGA CCGAGACGAC CTACGACGAC
GCAGGTCGTG TGCTCACTCT CCGCGTCGGC GGAGAGCTGG TGGCCACCGC CACCTACGAC
AGCGCCGGTG AGCTGTCCGG TGTCACCTAC GGCAATGGTT CCGCGCTCCG CTCGCTCGGA
CAGGACGCGT CCGGGCGGGT CACGTCGCTG GCGTGGCGCA CCTCGGACGG CCGCGACGTG
GTCTCCTCGG TGACCAGGTC GAAGTCCGGC ATGGTCGTGG ACGAGTCGCT GGGCGGGGTG
GACGCCCGCC CCGACGGTCC GAACTACTCG TACGACGCGG CGGGCAGGCT CGTGGAGGCC
TACGTCCCAG GCCACCACTA CAGCTACGAC TTCACCTCCC CCGTACCCCA GGGGTGTCCC
GAGGGGACGG TCGGCAACGC TGGTCGCAAC ACCAACCGGG TCCGCTTGGT GGACCGCACC
GCGTCCGGCA CCACCGAGAC CGGCTACTGC TACGACAGCG CGGACCGGCT CGTCGCCGTG
GTGGGGGACA CCCAGGTGAC GGATATCCGC TACGACGAGA GCGGCAACAC CACCCGCTTC
ACCTCGGGCG GCTCGACCAC CCACCTGGAG TGGGACTCCG AGGGCCGCAA CACCTCGGCC
CGCTCGGAAG GCGTGGATCC CGCCGAGGTG ACCTACCGGC GTGACGCGCA GGGCCGCATC
GTGGAGCGCG TCGAGGTCGT CGGCGGCAAG AGCAGGGGCA ACAGCTACGG CCACACCGCT
GACGGGGACA CCGCGGACGT GATCCTGGAC GCGGCAGGCC AGGTCGTGTC CAGGACGGTG
TCGCTGCCCG GTGGCGCGCT GCTCACCCTG CGCGGTGACG GCACCACCTA CGATCACCCG
AGCGTGCGCG GCGACCTGGT GCTCACCACG GACGCGAAGG GCGAGCAGGT CGGCGAACTG
CCCTTCTACA GTCCGTTCGG CGAACCGCTC AAGCCCAACG GCACGCCCGA CGCTGACGCC
GTCCCGGACA ACCTGCCGGA CGGGGTCGAC TACGGGTGGC TCGGCCAGCA CCAGCGGCCG
TACGAGCACG CGGGGGCGCT GTCGCTGGTC CAGATGGGCG CACGGCCGTA CAGCCCGCTG
CTGGGGCGGT TCCTGTCGAT CGACCCGGTG GACGGTGGCA GCGCCAACGA TTACGACTAC
GCCAACGGCG ACCCGGTCAA CCAGCTCGAC CTGGACGGCA ACTGGCCGGA CTGGGGGAAG
GTGGGCAGCT TCGTCATGAA GAACCGAGGC ACCATCGCCA GTGCTGGCGC CGCCGTGGGC
TGCATGCTCA CGGGCCTGCT GGCCTGCGGT ATTTTCACTG CAGGAGCCTA CGCGGTCAAT
GCCCAGCAGC GCATCGCTGA ACAGGGCTTC CGCAAGTCGC TCAAGGCGAA CGCGGCCGAC
CTGGTGCTCA CAGTGGGCAC GTTCGGCTTG TTCACGGTTC CCGTGGGGCT CGCCACCAAG
GTCGGTGGGA CAGGGCTTCG CGCTGGAGTC TCCAACACGC CCAAGGCGCT GCAGAAGGCG
AACCGCCCGG TGAACAAGAA CACCTACGCC CAAAAGCAGA TGGTGGCTGT CAACGTCATC
AGCACGGTCG TCGACCCAGG GGTCGTCAAG GCTGCTTTCT GCGTCGCGAA GCAAACCGCT
CGGCGAGTTG CCTGCGCGTT CTGA
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| Protein sequence | MHRRSTPWFH HPFFRRSIAL GTAVILGAAL VQPTANAQQA PVQAQLQPGK AEDLPPLPSH
PGDAVTPEWP AGDYGQLEQA APRIADPDAP ARKAAGEQVG YVEGESKLVE RKPTTDIYAN
PDGTKAAKLY QDVVNVPEDG DGALVPVDLT LESEGGRIKP KQAAAQVSLP ERTDGDAAIS
VTTPEGGQRA SLEFEGLADR AAEIDGQIAT YRDVQPGVDL ELYSMASGAK HVFVLHRAVE
EVEWHFTLDV PPGHTPEQQS DGAILVKDAD GAVKFVVAAP KMWDDVRDER SAEWRTGPVT
QRLERAGDTW KVVLVADRAW VDAPERKFPI KVDPGLHTLY AAFDAYVSDA FKDTNYDVDW
ESGLGYVNKV GYWPGAGENR TYAFYDFLPH VWGKQIVNAT WNAYWVNSHL ATPTNVRIRD
VACDWGRTSI TWNNQPCLGA ATKNSTGVGG KPTTIDITDW VAWWAGGGGN YRGIAVDTTE
GQNGWKKMAA AEAGPSGGAS AVIISYNDHP TQPANLGCTD CTPHSREVQL RVKSDDANND
KRIVQYFVST ETNVMDTYFA SGQAEIQPGQ GEAGWQPPKE SLRWNQKYFW QARVRDDHMP
SGSWVYSSVW NFTPINQTPP VPPQNKPVDR AVVSTKQPVL GAGAVTDPDA GDVVQYEFSI
ATGKDGRTGL VAKSGWIDKP EWTVPNGVLK DGVGYTWTVR SRDRDQDSWS QYAAARQLRL
DMRVGSQSVV ATDTTGPLSI NLANGNLSTG LSTPRMSTVG GEVGLNLAYN SLLVEESGLV
GSYFTGDSRT GILDTEEPVL VRTDPQVSFN WGDQSPYDPV VGRDGFRIRW QGFLKVPTSG
SYALGGQYDD GLRVWIGDDK VFDQWTDNCT CGGPAKFDGA VAKQLSAGVA YPVRIEYREF
SGPADIALWA RHGDGQAVPV PASWFTPTAS ALPSGWTLSA DVAAVGNGYT KASLTESGVT
ITDSTGASHA YSKTSDGGYR PPAGEYGTLS RDEGGKLTLI DTDGSTHVFG ASGQLEAVTS
PADARKPAAA RLEWTQSDLT SPVPRLTKIT DPVSGRAITL HYAGDQACAP PGGYHPTPPG
FLCAVKMPDG ATSNLFYLNG RLGRFQNPGG EYHDFGFNEH HLLDQLRTPL AIEWIVADSL
KRDSYAPNYR VDYDGPTSRR AAKLSSPEPT GFEQNPTRRV QHTYSYGSDS TEVAIVGMAT
GPGFARKVTR DLGGRTLTDT DGSGRTKRHE WAEDDKQLSV TDSAGRKSTT VYDAKGNPTE
SYGPAPARCF GGDRRPLAPA PEGCDKIPTS RTGYDEGFTG LGATWWNNPS FSGDATAYST
SPVNTDWRAS APVTDVDFTS ALSGRLTGAL DVRTAGSYEF STTEDDPSDG LRVYVDDNLV
LDRTYSSQVL ASGPLGYWRL GENTTTMRDS SGHGRDGTYS GSAKQWQAGA LPDDQSTSVD
FHGGQAQVAP APFDLEGALT LEAWVKPRPN DAKGGWQDII SRWNGGDDKA MPYEFTITPE
GKLEFRQIGA TPGIRRTVSD DSVSLNQWNH AVVTRGADNQ ITFYLNGKKS GGAKLAVPAK
VNAVPLTIGN RPGGATTDAL LDEVAVYDRA LTEKEVAGHS GAAGAVNTPK TKSTLSQGSH
RVRVEYSQRA LTGNLTRETG AAAVLWKRDG ETATTVPADV LTPDYGLTTS TTTADSDSRP
DRRTTTSYTG EGHDPAYGLV TSTALDPAGL NLVNGTGYEK PGDGLLRRTT RTLPSGTPMA
HTYYGNTETR PNPCQPGAEP VVQSGLSKTS GGVSGRVDER VYDLRGRVVA EAAPGGWTCT
AYDSRGRMTK IAHPASGSTP ARVVSYDYAV GGDPLATSVS DSAGTITTRV DLLGRIASYT
DVHGLTTIPE LDLGGRVVRE TTKAPGQAGD LPATETTYDD AGRVLTLRVG GELVATATYD
SAGELSGVTY GNGSALRSLG QDASGRVTSL AWRTSDGRDV VSSVTRSKSG MVVDESLGGV
DARPDGPNYS YDAAGRLVEA YVPGHHYSYD FTSPVPQGCP EGTVGNAGRN TNRVRLVDRT
ASGTTETGYC YDSADRLVAV VGDTQVTDIR YDESGNTTRF TSGGSTTHLE WDSEGRNTSA
RSEGVDPAEV TYRRDAQGRI VERVEVVGGK SRGNSYGHTA DGDTADVILD AAGQVVSRTV
SLPGGALLTL RGDGTTYDHP SVRGDLVLTT DAKGEQVGEL PFYSPFGEPL KPNGTPDADA
VPDNLPDGVD YGWLGQHQRP YEHAGALSLV QMGARPYSPL LGRFLSIDPV DGGSANDYDY
ANGDPVNQLD LDGNWPDWGK VGSFVMKNRG TIASAGAAVG CMLTGLLACG IFTAGAYAVN
AQQRIAEQGF RKSLKANAAD LVLTVGTFGL FTVPVGLATK VGGTGLRAGV SNTPKALQKA
NRPVNKNTYA QKQMVAVNVI STVVDPGVVK AAFCVAKQTA RRVACAF
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