| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2729 |
|---|
| Symbol | |
|---|
| ID | 8326918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 3141299 |
|---|
| End bp | 3142846 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644943268 |
|---|
| Product | TAP domain protein |
|---|
| Protein accession | YP_003100509 |
|---|
| Protein GI | 256376849 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.196617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGACGGA TTTCTCGGGC GCTCGGCGCG GTGGCGGCTT GTGGGGCGCT GGTGACGGGT
GTGGTCACCG GTGTGGCGAG CGCCCAGGTC GAGCAGCGGG GGGACGCGGG GCACCGGGCG
GACATCGCCT GGGGACCGTG CGAGGAGATG CCCGCGGTGG AGTGCGGGAC CGCGGAGATG
CCGGTGGACT GGGGGAGGCC TCGGGGGGAG AAGTTCGACC TGGTGCTGGC CAGGCGCAAG
GCGACCGATC CGGCCGCGCG CAAGGGGGTG CTGTTCGTCA ACCCCGGCGG GCCGGGTGGG
TCCGGCGTGG ACTTCGTGAT GGCGGCGGAC ACGTACTTCA GCGCCGAGCT GCTGGCGAAG
TTCGACGTGA TCGGCGTCGA CCCGCGCGGG GTGGCGCGCA GCAACCCGGT GGTGTGCTCG
GCGGAGAAGG TGGCGCAGCA GCCGTCGAGC TACCCGGCCG ACCAGGCCGG GTTCGAGGCG
CTGCGGCGGT ACAACCGGGA GCTGGCCGCC GACTGCCGCG AGCGCACCGG GCCGCTGTTC
GACCACGTGG ACACGCTCAG CGGCGTGGAG GACATGGACG CGGTGCGGCG CTCGCTGGGT
GAGCGGGAGC TGTCCTACTA CGGGGTCTCG TACGGCACGC TCATCGGGCA GCAGTACGCG
CAGCGGCACG GCGACCGGGT GCGGGCGATG GTGATCGACA GCAACATGGA CCACGACCAG
GGGACCTGGG AGTTCGGCAC GAAGGAGGCC GTGGGCGCCG AGGACTCGTT CCTGGAGTTC
GTGGCGTGGT GCGGGCGTGA CGCATCCTGC GCGCTGCACG GTCGGGACGT CCCGGCGCTG
TGGAAGCAGC TGCTGGACCG GGCCGAGCGG GGCGAGCTGA CCCACCCGAA CGTGCCGGGG
CTGGCGCTCG ACCGGGCCTT CCTGCGCTCG CTGGTGCTGG GCGCGCTGTA CGGGCCGTCG
TGGCCGGGGA TCGCGGACTT CCTGGTGGCG CTGGAGGCGC AGGGCGGCTC GGCGGTCGCG
GGTGCGGGCG CTCGGGAGCC GGAGCTGGCG CAGAACCCGT TCGAGGTGTT CTGCCAGGAC
TGGAACCTGC CGCTGCGCGA CCACCGCGAG TTCGCCCGGC TGCGGGCGCG GTCGCTGGAA
CTGGCCCCGA ACATGGAGGG CTCGACGCTG GGCGAGAGCG CGATCGCGGC CTGCCAGGGG
CGCGAGGACG CGGTGGACAA CCCGCAGGGG CCGTGGCGGG TCGCGCCGGG GACGCCGAAG
GTGCTGATGC TGAACGCGCT GCACGACCCG TCGACGCCGT ACTCGTGGGC GGTCGGCGCG
CACCGGCAGG CGCGGGGCGC GGCGGTGTTG CTGACGTACG AGGGCTGGGG GCACGGGGTG
TACGGGCGCG GTGCGTGCGC GGACGGGCAC GCGGACCGGT ACCTGGTGGA CCTGAAGGTG
CCGCGCGAGG GGACCCGGTG CGCCGCGGTG GAGCCGTCGG GTGCGGCGGA GCGCTCGCGG
GCCTCGGTTC CGGGTGGTGT CGGGGTGGGG CGGCCCACCT GGGGCTGA
|
|---|
| Protein sequence | MRRISRALGA VAACGALVTG VVTGVASAQV EQRGDAGHRA DIAWGPCEEM PAVECGTAEM
PVDWGRPRGE KFDLVLARRK ATDPAARKGV LFVNPGGPGG SGVDFVMAAD TYFSAELLAK
FDVIGVDPRG VARSNPVVCS AEKVAQQPSS YPADQAGFEA LRRYNRELAA DCRERTGPLF
DHVDTLSGVE DMDAVRRSLG ERELSYYGVS YGTLIGQQYA QRHGDRVRAM VIDSNMDHDQ
GTWEFGTKEA VGAEDSFLEF VAWCGRDASC ALHGRDVPAL WKQLLDRAER GELTHPNVPG
LALDRAFLRS LVLGALYGPS WPGIADFLVA LEAQGGSAVA GAGAREPELA QNPFEVFCQD
WNLPLRDHRE FARLRARSLE LAPNMEGSTL GESAIAACQG REDAVDNPQG PWRVAPGTPK
VLMLNALHDP STPYSWAVGA HRQARGAAVL LTYEGWGHGV YGRGACADGH ADRYLVDLKV
PREGTRCAAV EPSGAAERSR ASVPGGVGVG RPTWG
|
|---|
| |