Gene Amir_2726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2726 
Symbol 
ID8326915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3136848 
End bp3138524 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content76% 
IMG OID644943265 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_003100506 
Protein GI256376846 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1021] Peptide arylation enzymes 
TIGRFAM ID[TIGR02275] 2,3-dihydroxybenzoate-AMP ligase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCG ATCCGAGCAC CACGAACCCC ACCGGGCGGG GGCACCAGCG CGACCACGCC 
CCGTGGCCGC CGGAGTTCGT CGAGCGGTAC CGGGACGCCG GGCACTGGAC CGGGCGGACG
TTCGGGGCCC TGCTGGCGGA CACCGCGCGC GAGCACCCGA CCCGCACCGC CGTCGTCGGC
GAGCGGGACG GCGTCACCTC GCGGTGGTCG TACGCGGAGC TGGACGAGCG GGCGCACCGG
GTCGCCGCCG GGCTCGTCGC GCGCGGCATC GGGGCCGGGG ACCGGGTGGT GCTGCAACTG
CCGAACATCC CCGAGTTCCT GCCGGTGGTG TTCGGGCTGT GGCGGGCGGG CGCGTGGCCG
GTGTTCGCGC TGCCCGCGCA CCGGCAGAGC GAGCTGACGC ACTTCGCGCG CCAGTCCGAG
GCCGTCGCGA TCATCACCAC CGGCGTGCAC GAGCGGCACG ACCACGCGGC CACCGCGCGG
GCGGTCGCGG CCGAGGTGGC CTCGGTGCGG GACGTGCTCG TGGTGGGCAC GCCCGAGTTC
ACCGACCTGG CCGCGACGCC GCCGCGCGAG CTGCCCGAGC CCGATCCGGG GAGCGTGGCG
TTCCTCCAGC TCTCCGGCGG CAGCACGGGA CTGCCGAAGC TGATCCCGCG CACCCACGAC
GACTACCTGT ACAGCGTCCG GGAGAGCGCG CGGATCTGCG AGCTGACCGA GGAGAGCGTG
TACCTGGTCG CGCTGCCGGT CGCGCACAAC TACCCGATGA GCAGCCCCGG AATCCTCGGC
GCGGTCCACG CAGGCGCGAG GATCGTGCTG GCCCCGCGCC CGGACGCGGA CACCGCGTTC
CGGCTGATCG AGGCCGAGGG CGTCACGATC ACCGGCGTGG TGCCGCCGCT GGCCGCCGCG
TGGACCCAGG CCGCCGCCCG CACCGACCGC GACCTGTCCA CCCTGGACGT CCTGCTGGTC
GGCGGCGCGA AGTGCGGCCG GGAGCTGGCC GCGCGGATCG GGCCCGCGCT GGGCTGCCGG
TTGCAGCAGG TGTTCGGCAT GGCCGAGGGC CTGGTCTGCT ACACCCGGCT GGACGAGCCG
CAGGAGCTGG CGCTCACCAC GCAGGGCCGC CCGATGTCCG AGGACGACGA GGTGCGCGTG
GTCGACCCGG ACGACCCGGC CGCGCCCTCG CACGCCGAGG TGGCGCCGGG CGAGGTGGGC
GCGCTGCTCA CCAGGGGGCC TTACACGATC CGGGGCTACT ACCGGGCCGA CGCGCACAAC
GCGACCGCGT TCACCGAGGA CGGCTTCTAC CGGACCGGGG ACCTGGTGCG GCGCCTGCCG
TCCGGGCACC TGGAGGTGGT GGGCCGGGCC AAGGAGCAGA TCAACCGGGG CGGGGAGAAG
GTCGCCGCCG AGGAGGTCGA GGACCACCTG ATGGCGCACC CGCTGGTGCT GGACGCGGCG
GTGGTCGCGG TGCCGGACGC CTACCTGGGC GAGCGGACCT GCGCCTACGT GGTGCCGGTG
CCGGGCGGCG AGGAGCCGAC CGGGCCGCAG CTGCGCCGGT TCGTGCGCGA GCGGGGCGTG
GCCGCGTTCA AGGTGCCGGA CCTGGTGCGG GTGGTGCCGG AGTTCCCCGT GACCGGGGTG
GGCAAGACGA GCAAGCGGGA ACTGCGCGCG GCGCTGGCCG CCGCCGAGGA GGGGTGA
 
Protein sequence
MSADPSTTNP TGRGHQRDHA PWPPEFVERY RDAGHWTGRT FGALLADTAR EHPTRTAVVG 
ERDGVTSRWS YAELDERAHR VAAGLVARGI GAGDRVVLQL PNIPEFLPVV FGLWRAGAWP
VFALPAHRQS ELTHFARQSE AVAIITTGVH ERHDHAATAR AVAAEVASVR DVLVVGTPEF
TDLAATPPRE LPEPDPGSVA FLQLSGGSTG LPKLIPRTHD DYLYSVRESA RICELTEESV
YLVALPVAHN YPMSSPGILG AVHAGARIVL APRPDADTAF RLIEAEGVTI TGVVPPLAAA
WTQAAARTDR DLSTLDVLLV GGAKCGRELA ARIGPALGCR LQQVFGMAEG LVCYTRLDEP
QELALTTQGR PMSEDDEVRV VDPDDPAAPS HAEVAPGEVG ALLTRGPYTI RGYYRADAHN
ATAFTEDGFY RTGDLVRRLP SGHLEVVGRA KEQINRGGEK VAAEEVEDHL MAHPLVLDAA
VVAVPDAYLG ERTCAYVVPV PGGEEPTGPQ LRRFVRERGV AAFKVPDLVR VVPEFPVTGV
GKTSKRELRA ALAAAEEG