Gene Amir_2709 details

Gene Information

• Locus tag: Amir_2709
• ID: 8326898
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 3108506
• End bp: 3109084
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 644943249
• Product: regulatory protein TetR
• Protein accession: YP_003100490
• Protein GI: 256376830

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCGACGC CCGATCGCAC GTCCGTCGCC GAGATCGTCC GGGCGGGGCG GGATCTGCTG 
GAGTCGCGCG GCGCCGCCGG GCTGATCATG CAGGCGGTCG CCGAGCGGGT CGGGGTGCGG 
GCACCGTCGC TCTACAAGCG CGTGCGCAAC CGCGAGGAGC TCGTCGTCCT GATCACCGAG 
GCCACGGCGG ACGACCTCGG GGCGCTGCTC GCCTCCGCCG CCGACGACCT CGCGGGCGCG 
GACGCGCTGG CCGCGATGGC GCGCGCGATC CGCGTGTTCG CGCACGAGCG GCCGGTCGGG 
TTCGCGCTGG TCTTCAGCTC CGGGGTCGCG ATGGCGCAGC CGGTGCTGGC GCGGGTGGCG 
GCACCCGTGC TGCGGGCCTC GGCGGCGCTC GTGGGGCAGG AGCGGGCGCT GGACGCGGCG 
CGCACGTTCA CCGCGTGGGC GCACGGGTTC CTGACCATGG AGCTGGGCGG CGGGTTCACC 
CTGGGCGGCG ACGTCGACCG GGCCTACGAG TACGGCGTCA CCGTGCTCAC CGACGCGCTG 
CGCGGGCGGG GCGCGAGCCC GACCCCGGCG GACGGGTGA 

 

Protein sequence

MPTPDRTSVA EIVRAGRDLL ESRGAAGLIM QAVAERVGVR APSLYKRVRN REELVVLITE 
ATADDLGALL ASAADDLAGA DALAAMARAI RVFAHERPVG FALVFSSGVA MAQPVLARVA 
APVLRASAAL VGQERALDAA RTFTAWAHGF LTMELGGGFT LGGDVDRAYE YGVTVLTDAL 
RGRGASPTPA DG