| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2685 |
|---|
| Symbol | |
|---|
| ID | 8326874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3057462 |
|---|
| End bp | 3058352 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644943225 |
|---|
| Product | proline-specific peptidase |
|---|
| Protein accession | YP_003100466 |
|---|
| Protein GI | 256376806 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | [TIGR01250] proline-specific peptidases, Bacillus coagulans-type subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.492833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCCCA GCGCCAAGGG AACGGTGCCG TTCGGGCCGT ACCGCACGTG GTACCGGGTC
ACCGGGGACC TGAACGGTGA CCGCCCTCCG GTGGTCGTCG TGCACGGCGG TCCGGGCAGC
ACCCACGACT ACCTGCTGCC GCTGACCCGC CTGGTCGACG ACGGCTGGCC GGTGGTGCAC
TACGACCAGC TCGGCAACGG CGGCTCCACG CACCTGCGGG ACCGGGGAGC GGACTTCTGG
ACGTCCGAGC TGTTCCTTGA CGAGCTGGAG AACCTGCTGG GGGCGCTCGG GATCGCCGAC
CGGAACGTCC TGTTCGGACA GTCCTGGGGC GGTGTCCTGG TCGCCGAGTG GGCGGCCCGC
AGGCCGAAGG GCCTGCAGGG CCTGGTGATC GCCAACGCCC CCGCCTCGTA CCCGCTGTGG
ATCGAGGAGC TGGTGGAGCT GCGCAAGACC CTGCCGCCGG TGGTCAACGA GCGCCTGCTG
CGCCACGAGG CCGCGGGCAC CACCGACAGC GCGGAGTACC GCTCCGCCAG CGAGGTCTTC
TACCGGAGGC ACGTGTGCCG CGTCCAGCCG GTGCCCGCGG AGCTGGAGGC GAGCCTGCTG
GAGATCTCGG CGGACCCGAC GGTGTACGGG ACCATGAACG GCCCCAACGA GTTCCACATC
ACCGGCACCC TCAAGGACCA CTCGGTGATC CCGCTCCTGC CGAACATCAC CGCGCCCACC
CTGGTGCTGC GCGGCGAGCA CGACGAGATC ACCGAAGCCG CCACCGCCCC GTTCCACGAG
CTGATCCCCG GCGCCCACTA CGAGGTCGTC CCCGACTCCA GCCACCTGCC GCACGCGGAG
AACCCGGAGC ACTTCCACCG GGTGCTGCTG GAGTTCCTGA AGGGGCTGTA G
|
|---|
| Protein sequence | MVPSAKGTVP FGPYRTWYRV TGDLNGDRPP VVVVHGGPGS THDYLLPLTR LVDDGWPVVH
YDQLGNGGST HLRDRGADFW TSELFLDELE NLLGALGIAD RNVLFGQSWG GVLVAEWAAR
RPKGLQGLVI ANAPASYPLW IEELVELRKT LPPVVNERLL RHEAAGTTDS AEYRSASEVF
YRRHVCRVQP VPAELEASLL EISADPTVYG TMNGPNEFHI TGTLKDHSVI PLLPNITAPT
LVLRGEHDEI TEAATAPFHE LIPGAHYEVV PDSSHLPHAE NPEHFHRVLL EFLKGL
|
|---|
| |