Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2683 |
Symbol | |
ID | 8326872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3036332 |
End bp | 3041137 |
Gene Length | 4806 bp |
Protein Length | 1601 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644943223 |
Product | Acyl transferase |
Protein accession | YP_003100464 |
Protein GI | 256376804 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3321] Polyketide synthase modules and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCTCCA ACGAAGTCAA GCTCCGCGAG TACCTGCGCC GCGTCACCTC CGAGCTGCAC GACACCGACC AGCGGTTGCG CGAGCTGCAG GACCGGGCGA GCGAGCCCAT CGCCGTCGTC GGCATGGGCT GCCGCTACCC CGGTGGCGCG AACTCCCCCG AGCAGCTGTG GGAGCTGCTG CGCGGGGGCG TCGACGCCAC CTCCGACATG CCGGGCGACC GGGGCTGGGA CGTCGACGGG CTCTACCACC CCGAACCCGG CAACCCCGGC AGCATCTACG TGCGGCGCGG CGGGTTCCTG CACGACGCGC CGCTGTTCGA CCCCGGCTTC TTCGGCATCA GCCCGCGCGA GGCCGCCGAG ATGGACCCGC AGCAGCGGGT GCTGCTGGAG ACCGCGTGGG AGGCGCTGGA GGACGCGGGC ATCGACCCGG CCGGTCTCAA GGGCAGCAGG ACTGCCGTCT ACGCCGGTGT GGTCTACCAC GACTACCCCA ACAGCTTCGG CTCCGGCAGC CTGGTGTCCG GCCGGGTCGC CTACCACCTG GGCCTCGAGG GGCCCGCGCT GACGATCGAC ACCGGCTGCT CCTCGTCGCT GGTCGCGATC CACCTGGCCT GCCAGGCGCT GCGCTCCGGG CAGACGCCGC TCGCGCTCGC GGGTGGCGCC ACGGTCATCT CCACCACCGA CACGTTCGTC GAGTTCTCCC GCCAGCGCGC GCTCGCCGCC GACGGCCGCT GCAAGTCGTT CTCCGCCGCC GCCGACGGCG CAGGCTGGTC CGAGGGCTCG GGCGTGGTCG TGCTGGAGCG GCTGTCCGAC GCGCTGCGCA ACGGGCACGA GGTGCTGGCC GTGGTGCGCG GCAGCGCGGT CAACCAGGAC GGCGCGTCCA ACGGCATCAC CGCCCCCAAC GGGCCCTCGC AGCGCCGGGT CATCCACGCG GCCCTCGCGG ACGCGCGGCT GTCCGCGCGC GAGGTCGACG CGGTGGAGGC GCACGGCACC GGCACCCGCC TGGGCGACCC GATCGAGGCG CAGGCGCTGC TCGCGACCTA CGGGCAGGAC CGCGAGGAGC CGCTGCTGCT GGGCTCGCTC AAGTCCAACA TCGGCCACAG CCAGGCGGCG GCGGGCGTCG GCGGCGTGAT CAAGGCCGTG CTGTCGATGC GCCACGGCGT CCTGCCGCGC ACCCTGCACG TCGACGCGCC CTCGCCCGAG GTCGACTGGA CCGAGGGCTC CGTCGCGCTG CTCACCGAGG AGACCACCTG GCCGCAGACC GGTCGGCCGC GCCGGGTCGG GGTGTCCTCG TTCGGGATCA GCGGCACCAA CGCGCACCTC GTGCTGGAGC AGGCCCCCGA GGTCGCTGCC GAGACCGCTG AAGCCGAGAT CCCCGCCGCC TCCCCGGTGG TGCCGTGGGT GCTGTCCGGC CGCACCGCCG ACGCCCTGCA GGCGCAGGCC GCCCGGCTGC GCGACCACCT CGCCACCCGC GAGGTCGGTT CGCCGCGCGA CGTCGCCTGG TCGCTGGCCA CCACCCGCAC CGCCTTCGAG CGCCGCGCCG TCGTCCTGGG CGCGGACCGC GCCGAGCTGG AGGCCGGGGT CGCCGCGCTC GCCGAGGGCC TGCCGTCCCC GTCCCTGGTC ACCGGCGCCG CCGACGTGGT CGGCAAAATC GTGTTCGCCT ACCCCGGCCA GGGCTCCCAG TGGGAGGGCA TGGCCGCCGA GCTGCTCGAC ACCTCGCCGG TGTTCGCCGC GAGGATGGCC GAGTGCGCCG AGGCCCTGTC GGCGTTCCTG GACTGGGACC TGATCGCGGC CGTGCGCGGC GGCGAGGGCG CCCCGTCGCT GGAGCGCGGC GACGTCGTGC AGCCCGCGCT GTGGGCGGTC CTGGTGTCGC TGACCGCGCT GTGGGAGCAC CACGGCGTGC GGCCGGACGC GGTCGTCGGC CACTCGCAGG GCGAGATCGC GGCGGCCGTC GTCGGCGGCC ACCTGTCGCT GCTCGACGGC GCGCGCGTGG TCGCCCTGCG CGGCATCGCG ATCCGGGAGA GCCTGGCCGG TCGCGGCGGG ATGCTCTCGA TCGGGCTGCC GCTGGCCGAG GTCGAGCCGT ACCTGGAGGC CATGGACGGC AGGCTGTCCC TCGGCGCGGT CAACGGCGCC GCCTCCACCG TCGTCTCCGG CGACCTCGAC GCGCTCGCCG AGCTGACCGC GGTCCTGGAG GAGCGGGACG TGCGGGCCCG GCGGGTCAAC ATCGACTACG CCTCGCACTC CGCGCAGGTC GTCGAGGTCG AGCAGCGGAT GCTGGCCGAC CTCGCCCCGA TCAGCCCCCG CGCGGGCGCG ATCCCGATGC TGTCCACGGT CACCGGCGAG TTCGTCGCCG ACGGCCAGCT CGACGCCCGC TACTGGTACT CGAACCTGCG CTCCCCGGTG CTGTTCGCCC CGGCCGTGCA GGCGCTCGCC GAGTCGGGGC ACGCGGTGTT CGTGGAGGTC AGCCCGCACC CGGTGATCGC GCCGAGCATC GGCGAGACCC TGGACGCCCG CGAGCAGCCC ACCGTCGTCT CCGGCACGCT GCGCCGCGAC GAGGGCGGCC TGGCCCGCTT CACCCGCTCC CTGGCGGAGC TGCACGTGCG CGGCGGCGTC CGCCCGGACT TCGCCGCGCT GCTGCCCGGC GCGCGCCCGG TCCGGCTGCC CACCTACGCG TTCCGGCACG CCCACTACTG GCTGACCGAC GCCCCGGCCG CCGAGGCCGA CCCGGCCTCC GCCGCGCTGT GGGCCGCGCT GGAGACCGGC GGCGTCGACT CGCTGGCGCG CGAGCTGTCC GTGGACGAGG CCGCGCTGGG CGCGGTGCTG CCCGCGCTGT CCGCGTGGCG CGACGGGTTC CGCGAGCGGT CCACCGTGGA CTCCTGGCGC TACCGGGTCG AGTGGCGGGC CGTCGACCAG CCGGTCCCGC CGGTGGCCAC CGGCTCCTGG CTGCTGGTGG TGCCCGAGTC GCTGCGCGAG GACAAGCGGG TCATCGCCGT CGTGGACGGC CTGACCACGC GCGGCGCGGA CGTGCTGCCG GTGCGGGTGG ACGGCCTGGA CCGGGCCGCC GCCGCCGACC TCGTGCGCTC CGCCGTCGCG GGCGGCCTGC CCGAGGGCGT GCTGTCCCTG CTGGGCCTGG ACGACCGGCC GCACCCGCTG TTCCCGTCGC TCTCGCGCGG CGTCGCCGCC TCGGTCCCGC TGGTGCAGGG CCTGGACGAC GCGGGCGTCA CCGCGCCGCT GTGGTTCGCC ACCTCGCGCG CCGTCGGCGC CGGGCTGGAG GAGCCCGCCG ACCCGCGCCA GAGCGCCCTG TGGGGCATCG GCACCGTCAT GGGCCTCGAC CGGCCGCAGA CCTGGGGCGG CGTCGTGGAC CTGCCCGCCG ACGTGGACGA CCTCGTGGTG GAACGCCTGG TCGGCGCGCT CTCCGGCGCC GAGGACCAGG TCGCGGTGCG CCCGGCGGGC ACCCTCGCCC GCCGCCTGGT GCGCGCCCCC GGCGGCGCGG TGGCGGCCAA GTGGGCCCCG CGCGGCACGG TCCTGGTCAC CGGCGGCACC GGCGGCGTCG GCGCGCACCT GGCGCGCTGG CTGGTGGAGA CCGGCGCGGA GCACGTGGTG CTGGCCAGCC GCCGCGGCCC GGACGCGCCC GGCGCGGCCG AGCTGTGCGC GGAGCTGGAC GGCAAGGTGG AGGTCGTGGC GCTCGACGTC GCCGACCGGC ACGCCGTCGC CGCGCTCGTC GCCTCGCTGC CCGACCTCAC CTCCGTCTTC CACGCGGCGG GCGCGATGCG CCGCGAGTCC GGCGTCGACG ACGCCTCGGT GGCCGAGCTG GCGGAGCTGG CCGACGCCAA GGTCCTCGGC GCGCTGCACC TGGACGAGCT GCTGGCCGAT CGCGAGCTGG ACGCGTTCGT CGTGTTCTCC TCCGGCGCGG CCGTCTGGGG CTCCGGCGGC CAGATCGGTT ACGCCGCAGC GAACTCCGTC GTCGACGGCG TCGTCCGCAG CCGCCGCGCG CGCGGCCTCA CCGGCACCTC CATCGCCTGG GGCACCTGGG GCGGCGGCGG CATGTCCTCC GGCGAGACCG GCGACCACCT GGCCCGCATG GGCCTGGGCT CCATGGACCC CGCGCTGGCC CTGTCCGCCC TGCAGGGCGT GCTGGACCGC GACGAGGCCC ACCTGGTCGT CACCGACATG GACTGGGCCC GCTTCGCCCC CGCCTACGCG CTGTCCCGCC CCCGGCCGCT CATCGAGGCC ATCCCCGAGG TCAGGGCCGC GCTCGACCCC GTGGACGAGC CCGGCGAGAG CACCGGCTCG GACCTCGCGG CCAGGCTCGC CCCGCTGCCG GACGGCGAGC GCCGCGCCCT GCTGCTCGAC CTGGTCCGCT CGCACGTGGC CGCCACCCTC GGCTACGCCA CCACCGACGA GGTCCAGCCC ACCAGGGCGT TCAAGGACCT CGGCTTCGAC TCGGTCACCG CCGTCGAGCT GCGCGACGTG ATCGGCTCCG CCACCGGCGT CCGGCTCACC GCGACCGCCG TGTTCGACCA CCCGACCCCC GCCGCGCTCG TGGAGCTGCT GCACGGCGAG CTGGTCGACG AGGGCGAGCG CCCCGTCGGC TCGGTGCTGG CCGAGCTGGA CCGGCTGGAG ATCGCCGCGT CCGGCCTCGC GCCGGAGGAG ATCGAGGCCG GTCACCTCAC CACCCGGTTG CGCGCCCTGC TCACCAGGCT CGACCAGGCC GTCGCGGGCG GTGGGCCCGC CGTGGCCGAC CAGCTCGAAG CGGCCTCCGC CGACGACATC TTCGACTTCA TCGACAACGA GCTCGGCATG GCCTGA
|
Protein sequence | MSSNEVKLRE YLRRVTSELH DTDQRLRELQ DRASEPIAVV GMGCRYPGGA NSPEQLWELL RGGVDATSDM PGDRGWDVDG LYHPEPGNPG SIYVRRGGFL HDAPLFDPGF FGISPREAAE MDPQQRVLLE TAWEALEDAG IDPAGLKGSR TAVYAGVVYH DYPNSFGSGS LVSGRVAYHL GLEGPALTID TGCSSSLVAI HLACQALRSG QTPLALAGGA TVISTTDTFV EFSRQRALAA DGRCKSFSAA ADGAGWSEGS GVVVLERLSD ALRNGHEVLA VVRGSAVNQD GASNGITAPN GPSQRRVIHA ALADARLSAR EVDAVEAHGT GTRLGDPIEA QALLATYGQD REEPLLLGSL KSNIGHSQAA AGVGGVIKAV LSMRHGVLPR TLHVDAPSPE VDWTEGSVAL LTEETTWPQT GRPRRVGVSS FGISGTNAHL VLEQAPEVAA ETAEAEIPAA SPVVPWVLSG RTADALQAQA ARLRDHLATR EVGSPRDVAW SLATTRTAFE RRAVVLGADR AELEAGVAAL AEGLPSPSLV TGAADVVGKI VFAYPGQGSQ WEGMAAELLD TSPVFAARMA ECAEALSAFL DWDLIAAVRG GEGAPSLERG DVVQPALWAV LVSLTALWEH HGVRPDAVVG HSQGEIAAAV VGGHLSLLDG ARVVALRGIA IRESLAGRGG MLSIGLPLAE VEPYLEAMDG RLSLGAVNGA ASTVVSGDLD ALAELTAVLE ERDVRARRVN IDYASHSAQV VEVEQRMLAD LAPISPRAGA IPMLSTVTGE FVADGQLDAR YWYSNLRSPV LFAPAVQALA ESGHAVFVEV SPHPVIAPSI GETLDAREQP TVVSGTLRRD EGGLARFTRS LAELHVRGGV RPDFAALLPG ARPVRLPTYA FRHAHYWLTD APAAEADPAS AALWAALETG GVDSLARELS VDEAALGAVL PALSAWRDGF RERSTVDSWR YRVEWRAVDQ PVPPVATGSW LLVVPESLRE DKRVIAVVDG LTTRGADVLP VRVDGLDRAA AADLVRSAVA GGLPEGVLSL LGLDDRPHPL FPSLSRGVAA SVPLVQGLDD AGVTAPLWFA TSRAVGAGLE EPADPRQSAL WGIGTVMGLD RPQTWGGVVD LPADVDDLVV ERLVGALSGA EDQVAVRPAG TLARRLVRAP GGAVAAKWAP RGTVLVTGGT GGVGAHLARW LVETGAEHVV LASRRGPDAP GAAELCAELD GKVEVVALDV ADRHAVAALV ASLPDLTSVF HAAGAMRRES GVDDASVAEL AELADAKVLG ALHLDELLAD RELDAFVVFS SGAAVWGSGG QIGYAAANSV VDGVVRSRRA RGLTGTSIAW GTWGGGGMSS GETGDHLARM GLGSMDPALA LSALQGVLDR DEAHLVVTDM DWARFAPAYA LSRPRPLIEA IPEVRAALDP VDEPGESTGS DLAARLAPLP DGERRALLLD LVRSHVAATL GYATTDEVQP TRAFKDLGFD SVTAVELRDV IGSATGVRLT ATAVFDHPTP AALVELLHGE LVDEGERPVG SVLAELDRLE IAASGLAPEE IEAGHLTTRL RALLTRLDQA VAGGGPAVAD QLEAASADDI FDFIDNELGM A
|
| |