Gene Amir_2672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2672 
Symbol 
ID8326861 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3008596 
End bp3009199 
Gene Length604 bp 
Protein Length200 aa 
Translation table11 
GC content75% 
IMG OID644943212 
ProductLigA 
Protein accessionYP_003100453 
Protein GI256376793 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.229719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAAC CGACCCGGTG GGCCACCGAC ACCAAGCCCG GCCACTCGCA GTGGTACATC 
GAGCGCTTCC GCGCCATGCG GCGCGACGGC GCCGACCTGG CCCGGTGAGG CGCGCACGCT 
GGACGCGATG CTGCGGCGCG GGTCGCGGGT GCTCGACGCG GGCTGCGGCA CCGGCCGGGT 
GTCCGCCGAG CTGCACGCGC GGGGGCACGT GGTGGTGGGC GTGGACGCCG ACCCGGCGCT 
GATCGAGGCC GCGCGCGAGG ACCACCCCGA GGTGCCGACG CTGCTCGCCG CCGACCTGGC 
CGACCTGGAC CTGGCGGGGC AGGGCGTGAC CGAGCCGTTC GACGCGATCG TCTGCGCGGG 
CAACGTGATG ACGTTCCTGG CGGCGGGCAC CGAGGTCGAC GTGCTCAGGG GCTTCGCGGA 
CCACCTGGCG CCGGACGGCT TCGCGGTGAT CGGGTTCGGC ACCGACCGGG GGTACCCGCT 
GGCCGACTTC GACGCGCACT GCGCGGCGGC CGGGCTGGTG CTGGAGCAGC GGTTCGCGAC 
CTGGGACCTG CGGCCGTGGG AGAAGTCCGC GGGCTTCGCG GTGACGGTGC TGCGCAGGCC 
GTGA
 
Protein sequence
MGKPTRWATD TKPGHSQWYI ERFRAMRRDG ADLAGEARTL DAMLRRGSRV LDAGCGTGRV 
SAELHARGHV VVGVDADPAL IEAAREDHPE VPTLLAADLA DLDLAGQGVT EPFDAIVCAG 
NVMTFLAAGT EVDVLRGFAD HLAPDGFAVI GFGTDRGYPL ADFDAHCAAA GLVLEQRFAT 
WDLRPWEKSA GFAVTVLRRP