Gene Amir_2652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2652 
Symbol 
ID8326841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp2986179 
End bp2986871 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content74% 
IMG OID644943192 
ProductCRISPR-associated protein, Cse3 family 
Protein accessionYP_003100433 
Protein GI256376773 
COG category 
COG ID 
TIGRFAM ID[TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCCTGA CCAAGTTGAC CGTCGACGTG CGCTCCCGCG AGTTCCGCCG GGACCTGGCG 
AACCTGCACG AGATGCACCG CACTGTCATG TCCGGTTACC CGAGGGTCGA GGACGGCTCG 
CCCGCCAGGC AGACCCACGG GGTGCTGTGG CGGCTCGACG CCACGCCCGC CGGGTACACC 
CAGTACGTGC AGAGCCTGAC CCGGCCGGAC TGGACCGGGT TACCCGAGAC CCTGCTGACC 
TCGCCCGCCG AGGTGCGCTC GCTCGACCCG CTGCTCGACG CCATCGAGCC CGGCCGGGTG 
CTGGCGTTCC GGCTGCTGGC CAACGCCACC AAGGACAGCG TGCCCGCCGA GCCCGGTGGG 
CGCGGGCTGC GGGTGGCGCA CCGCACGCCC GAGGCGCAGG TGTCGTGGTT GGCGCGCAAG 
GGGCAGCGGC ACGGGTTCGC GCTGCGCGAC CGGCCCGACG GGGTGCCGGA CGTGACGCTG 
TGGTCCGCGC CCCGGATGAC CGGGCGCAAG AAGGCCGGGC GGCCGATCAC CGTGGACGCG 
GTGCGGTTCG ACGGGCACCT CGTGGTCACC GACGCGGACG AGCTGCGGGA GGCGGTCGGC 
AGCGGCATCG GGCGGGCCAA GGCGTACGGG TGCGGGATGC TCTCGCTCGC CAGGGCGCGG 
ATCGACCTGG GCGAGGTCGC CGAGGTCGCC TAG
 
Protein sequence
MFLTKLTVDV RSREFRRDLA NLHEMHRTVM SGYPRVEDGS PARQTHGVLW RLDATPAGYT 
QYVQSLTRPD WTGLPETLLT SPAEVRSLDP LLDAIEPGRV LAFRLLANAT KDSVPAEPGG 
RGLRVAHRTP EAQVSWLARK GQRHGFALRD RPDGVPDVTL WSAPRMTGRK KAGRPITVDA 
VRFDGHLVVT DADELREAVG SGIGRAKAYG CGMLSLARAR IDLGEVAEVA