Gene Amir_2648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2648 
Symbol 
ID8326837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2982534 
End bp2983016 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content73% 
IMG OID644943188 
Productribose 5-phosphate isomerase 
Protein accessionYP_003100429 
Protein GI256376769 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR02133] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCGC AGCTCCGGAT CGTCGTCGGC TCCGACGACG CCGGCTTCGA GTACAAGGAA 
GCCCTCAAGC GGGACCTGGA GGCCAGCGGC GCCGTCGTGT CCGTCGTCGA CGTCGGCGTC
GACCCCGACG GCCACACCCC GTACCCGGCG GTCGCGGTCT CCGCCGCCGA GATGATCGCC
AGGGGCGAGG CGGACCGCGC GCTGCTGGTG TGCGGCACCG GCCTCGGCGT GGCCATCGCC
GCCAACAAGG TGACCGGCGT GCGCGCCGTC ACCGCGCACG ACAGCTTCTC CGTCGAGCGC
GCCGTGCTCA GCAACAACGC CCAGGTGCTG TGCTTCGGCC AGCGCGTCGT GGGCCTGGAG
CTGGCCCGCC GCCTGGCCCG CGAGTGGCTG GAGTACCGCT TCGACGAGGG CTCGGCCTCC
GCGCAGAAGG TCGCCCTGAT CACCGAGTAC GACGAGGGCC GCGAGACCGC GGGGACGCGC
TGA
 
Protein sequence
MTAQLRIVVG SDDAGFEYKE ALKRDLEASG AVVSVVDVGV DPDGHTPYPA VAVSAAEMIA 
RGEADRALLV CGTGLGVAIA ANKVTGVRAV TAHDSFSVER AVLSNNAQVL CFGQRVVGLE
LARRLAREWL EYRFDEGSAS AQKVALITEY DEGRETAGTR