Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2648 |
Symbol | |
ID | 8326837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2982534 |
End bp | 2983016 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644943188 |
Product | ribose 5-phosphate isomerase |
Protein accession | YP_003100429 |
Protein GI | 256376769 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR02133] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCGC AGCTCCGGAT CGTCGTCGGC TCCGACGACG CCGGCTTCGA GTACAAGGAA GCCCTCAAGC GGGACCTGGA GGCCAGCGGC GCCGTCGTGT CCGTCGTCGA CGTCGGCGTC GACCCCGACG GCCACACCCC GTACCCGGCG GTCGCGGTCT CCGCCGCCGA GATGATCGCC AGGGGCGAGG CGGACCGCGC GCTGCTGGTG TGCGGCACCG GCCTCGGCGT GGCCATCGCC GCCAACAAGG TGACCGGCGT GCGCGCCGTC ACCGCGCACG ACAGCTTCTC CGTCGAGCGC GCCGTGCTCA GCAACAACGC CCAGGTGCTG TGCTTCGGCC AGCGCGTCGT GGGCCTGGAG CTGGCCCGCC GCCTGGCCCG CGAGTGGCTG GAGTACCGCT TCGACGAGGG CTCGGCCTCC GCGCAGAAGG TCGCCCTGAT CACCGAGTAC GACGAGGGCC GCGAGACCGC GGGGACGCGC TGA
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Protein sequence | MTAQLRIVVG SDDAGFEYKE ALKRDLEASG AVVSVVDVGV DPDGHTPYPA VAVSAAEMIA RGEADRALLV CGTGLGVAIA ANKVTGVRAV TAHDSFSVER AVLSNNAQVL CFGQRVVGLE LARRLAREWL EYRFDEGSAS AQKVALITEY DEGRETAGTR
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