Gene Amir_2628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2628 
Symbol 
ID8326817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2960280 
End bp2961107 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content70% 
IMG OID644943168 
ProductABC transporter related 
Protein accessionYP_003100409 
Protein GI256376749 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGGCT CGGCGATCGA GGTTCGCGGC GTTCACCGCG AGTACGGGAG CGGGGCGGCG 
AAGATGGTCG CCCTCAACGG GGTTGACCTG TCCATTCCCT CCGGCAGTTT CGTCAGCGTC
ATCGGGCCGA GCGGGTGCGG GAAGTCGACG ATGCTCCGCC TCATCGCGGG TCTGGAGACC
CCCGACGACG GCGACGTCAG CGTCTACGGC GTCAGCGCGG AGCAGGCGTG CGCGGCCAAG
ATGATCGGTC TTGTCCCGCA GGCGCCCGCA CTGCTGCCGT GGCTTTCCGT GCTCAGCAAC
GTCACTCTAC CCCAAAAGGT GAACCGGGGC GCGGCCAAAC GGCGGAAGAA GATCGCCCAG
GCGGCGCACC GGGACGTCGA CGTGGCCAAG CCCGACATGA TGGACCTGCT GCGCAAGGCC
GGCCTGGGCG ACGCCACGCA CAAGCTGCCC TCGGAGCTGT CCGGCGGGAT GCAGCAGCGG
GCCGCGATCG TGCGCGCCTT CGGCCTGCGC CCGGACGTGC TGCTGATGGA CGAGCCGTTC
TCCGCGCTGG ACGAGTTCAC CCGCGAGAGC CTGCAGGGCC AGCTGCTCGA CATGTGGGAG
GGGCTCAAGA CCACGGTGGT CTTCGTGACC CACTCCGTGG GAGAGGCCGT CCGCCTGTCG
GACACCGTGG TGGTCATGGC GGCCCGGCCG GGCCGCATCA CCGACATCGT GCCGATCGAC
CTGCCCCGGC CGAGGGACAC CGAGCTGATG AAGTCTCGGG AGTTCCACGA CCTGGAGGAC
CTGGTGCGGG ACAAGCTCCG CGCCGGCTGG GGAATGCACG CGGCGTGA
 
Protein sequence
MTGSAIEVRG VHREYGSGAA KMVALNGVDL SIPSGSFVSV IGPSGCGKST MLRLIAGLET 
PDDGDVSVYG VSAEQACAAK MIGLVPQAPA LLPWLSVLSN VTLPQKVNRG AAKRRKKIAQ
AAHRDVDVAK PDMMDLLRKA GLGDATHKLP SELSGGMQQR AAIVRAFGLR PDVLLMDEPF
SALDEFTRES LQGQLLDMWE GLKTTVVFVT HSVGEAVRLS DTVVVMAARP GRITDIVPID
LPRPRDTELM KSREFHDLED LVRDKLRAGW GMHAA