| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2596 |
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| Symbol | |
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| ID | 8326785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2929460 |
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| End bp | 2931043 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644943138 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003100379 |
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| Protein GI | 256376719 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.312555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGC CCCCACGCCG CGCCGACCAG CGGCGACCGG ACCAGCCGCC CCCCGGCGGG
AACCGCCCCG CGCAGCCCGA CCCGCAGCAG CCCGACTCCC GGCAGCCCGA CTCCCGGCAG
CCCGACCCGC AGCGCCCTGG CGGGCAGGAG CCCGATCCCC AGCGCTGGCG CGCGCTCGCG
GTGTGCCTGC TCGCCGGGTT CATGACCCTG CTCGACGTCA CCATCGTCAA CGTCGCACTG
CCCTCCATCC AGCGCGACAT CGGCGCCACC ACCGCCGAGC TGTCCTGGGT GGTCACCGGG
TACGCGCTCG CCTTCGGCCT CGTCCTGGTC TCCGCCGGCC GCCTCGGCGA CGACCTGGGC
CGCCGCCGGA TGTTCCTGAT CGCGCTCGCC CTGTTCACCC TCACCAGCGC CCTCGCCGGA
CTCGCCCCGG ACGGGACCTG GCTGGTGGTC GCCCGCCTGC TCCAGGGCGT CGCGGCGGGC
CTGCTCAACC CGCAGGTCGC CGGGTTCATC CAGCAGCTGT TCCCCGGTCG CGAGCGCGGC
AAGGCGTTCG GCCTGTTCGG CGCGGTGGTC GGGCTGTCCA CGGCGGTCGG CCCGCTGCTC
GGCGGCCTGC TGCTCCAGTG GGGCGGCGGC GCGGGCGGGT GGCGCTGGGT GTTCTACGTG
AACCTGCCCC TCGGCGCGCT CGCCCTGGTG CTCGGCCTGC GCCTGCTGCC CCGCGACCGG
CCCGCCGCGC GCGGTGGCGC CCGCAAGCCG CTGGACGCGG TCGGCGCGGT GCTGCTGGGC
GGCGCGGTCG TGTCGCTGAT GCTGCCGCTC GTGCTGTCCG AGCACGACCC GGCCACCGCC
CCGTGGTGGC TGATCGGGGT CGCGGTGGCG CTGGTGGCGG TGTTCGTGCC GTGGGAGCGC
GCGGCCAAGC GCCGCCACGG GCACCCGCTG GTGGACTTCG CGCTCCTGCG CACCCGCGGC
TACTCGACGG GCGTGGCGCT CGGGCTGGTC TACTTCGCCG GGTTCACCTC GATCTTCTTC
GTGCTCACCC TGTTCCTGCA GCAGGGCCAC GGGTACACGC CGCTGCAGGC CGGGCTCGCG
CTGACCACGT ACTCGGTGGG CGGCGCGACG GCCGCCGCGA TCGGCGGCAG GCTCGTCGGG
CGGCACGGCC GGGTCGTCGT CGTGGTCGGC CTCGCGCTGG AGGCCGCCGG GCTGGTCGTG
GTCGACCTGG TGCTGCGCGG CGCGCCCGAG CGCATCGGGC TCGCGATCGC CCTGCCGATG
CTCGTGGCGG GCATCGGCAA CGGCCTGGTC ATCGCCCCGA ACCAGACCCT GGCGCTGCAC
GACGTGCCGC CGAGGCAGAG CGGCACCGCC GCGGGCGTGC TCCAGACCGG GCAGCGGATC
GGGTCGGCGA TCGGGATCTC GGCGGCGGGC GCGGTGTTCT TCGCAGCGCT GGGCGGTGGC
GGGTGGGACC ACGCGATCAC CACCAGCCTG CTGGTGACCA TCGGGCTGAT CCTGCTGGCG
CTCGTCGTGG GGCTGGTGGA CCTGGTGCAG GGACGCCGTC GGCTGCGCGC GGCCGAGGTC
GAGCACGTGG GTTCCGGGGC CTGA
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| Protein sequence | MSTPPRRADQ RRPDQPPPGG NRPAQPDPQQ PDSRQPDSRQ PDPQRPGGQE PDPQRWRALA
VCLLAGFMTL LDVTIVNVAL PSIQRDIGAT TAELSWVVTG YALAFGLVLV SAGRLGDDLG
RRRMFLIALA LFTLTSALAG LAPDGTWLVV ARLLQGVAAG LLNPQVAGFI QQLFPGRERG
KAFGLFGAVV GLSTAVGPLL GGLLLQWGGG AGGWRWVFYV NLPLGALALV LGLRLLPRDR
PAARGGARKP LDAVGAVLLG GAVVSLMLPL VLSEHDPATA PWWLIGVAVA LVAVFVPWER
AAKRRHGHPL VDFALLRTRG YSTGVALGLV YFAGFTSIFF VLTLFLQQGH GYTPLQAGLA
LTTYSVGGAT AAAIGGRLVG RHGRVVVVVG LALEAAGLVV VDLVLRGAPE RIGLAIALPM
LVAGIGNGLV IAPNQTLALH DVPPRQSGTA AGVLQTGQRI GSAIGISAAG AVFFAALGGG
GWDHAITTSL LVTIGLILLA LVVGLVDLVQ GRRRLRAAEV EHVGSGA
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