| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2593 |
|---|
| Symbol | |
|---|
| ID | 8326782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 2927890 |
|---|
| End bp | 2928405 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644943135 |
|---|
| Product | Appr-1-p processing domain protein |
|---|
| Protein accession | YP_003100376 |
|---|
| Protein GI | 256376716 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGGA TCGAGTGCGT GGTCGGCGAC CTCACCCAGC AGGACACCGA CGTCGTCGTG
AACGCGGCCA ACTCCTCCCT GCTCGGCGGT GGCGGCGTCG ACGGCGCCAT CCACCGCGCG
GGCGGCCCGG AGATCCTCGC CGCGTGCCGC GAGCTGCGCG CCGGTCACCT CGGGGGCGGG
CTGCCCACCG GGCAGGCGGT CGCCACCACG GCCGGGCGGA TGCCCGCGCG CTGGGTCGTG
CACACCGTCG GACCGGTGTT CTCCGCCGAC GAGGACCGCT CCGAGCTGCT CGCCGACTGC
CACCGCAACT CGCTGCGCGT CGCCGCCGAG CTGGGCGCGC GGACCGTGGC GTTCCCGGCG
ATCTCCACCG GCATCTTCCG CTGGCCGCTC GACTCGGCGG CCCGGATCGC GGTCGCCGCC
GTCGCCGAGG CCGACGCGCC GGGCGTGGAG CTGGTGCGGT TCGTGCTGTT CGACGAGGCC
GCCCACGCGG TCTTCGGCGC CGCGCTCGAC GCGTGA
|
|---|
| Protein sequence | MPRIECVVGD LTQQDTDVVV NAANSSLLGG GGVDGAIHRA GGPEILAACR ELRAGHLGGG
LPTGQAVATT AGRMPARWVV HTVGPVFSAD EDRSELLADC HRNSLRVAAE LGARTVAFPA
ISTGIFRWPL DSAARIAVAA VAEADAPGVE LVRFVLFDEA AHAVFGAALD A
|
|---|
| |