| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2586 |
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| Symbol | |
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| ID | 8326775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 2922003 |
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| End bp | 2923367 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644943128 |
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| Product | Endo-1,4-beta-xylanase |
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| Protein accession | YP_003100369 |
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| Protein GI | 256376709 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGA CATCGAGGTC AGTTCCGAGG ACCGCCCTGG GCGCCGCCCT GCTGTCGGTC
ACGACGCTGG GCGCCGCGCT GCTGGTGAAC GCGCCCGTCG CGCAGGCGGC GACCACGCTG
GGCGCGTCGG CGGCCGAGAG CGGCCGGTAC TTCGGGGCCG CCGTGGCCGC GCACAAGCTC
AGCGACTCGG TCTACACGGG CATCCTCAAC TCGGAGTTCA CCTCGGTCAC GCCCGAGAAC
GAGATGAAGC TCGACGCGAC CGAGCCGACG CAGGGGCAGT TCACGTACAC CAGCGCGGAC
CGGATCGTGG CGCACGCGGC GGCGCGCGGC ATGAAGGTGC GCGGGCACAC CCTGGCGTGG
CACTCGCAGC AGCCGGGGTG GATGCAGTCG ATGGAGGGCG CGCCGCTGCG GTCGGCGATG
CTGAACCACG TCACGCAGGT CGCCACGCAC TACCGGGGCA AGATCGACTC GTGGGACGTG
GTGAACGAGG CGTTCGCCGA CGGCGATGGC GGCGGCAGGC GCGACTCGAA CCTGCAGCGG
ACCGGCAACG ACTGGATCGA GGCCGCGTTC CGCGCCGCCC GCGCGGCGGA CCCTGGCGCC
AAGCTCTGCT ACAACGACTA CAACACCGAT GACTGGACGC ACGCCAAGAC GCAGGCGGTG
TACCGCCTGG TGCAGGACTT CAAGACCCGC GGCGTGCCGA TCGACTGCGT GGGCTTCCAG
TCCCACTTCA ACCCGGCGAG CCCGGTCCCG TCGAACTACC AGACGACGCT GGAGAACTTC
GCCGCGCTGG GCGTGGACGT GCAGATCACC GAGCTGGACA TCGAGGGCTC GGGTTCGGCG
CAGGCGAGCA ACTACGACCG CGTGACGCGG GCGTGCCTGG CGGTGGCCCG GTGCAACGGG
ATCACGGTGT GGGGCATCAG GGACACGGAC TCCTGGCGAG CCTCGGGCAC CCCGCTGCTG
TTCGACGGCA GCGGCAACAA GAAGGCCGCG TACACGTCGG TCCTGGCCGC CCTGAACGGC
GGCACCACGC CGCCGACGTC GACCACGACG ACGACCACCA CGCCCGGCGG TCCGGCGGGG
TGCACGGCGA CGGTGTCGCT GAACTCGTGG AACGGGGGGT TCGTGGCGAC GGTGAAGGTG
ACCGCCGGGT CGGCGGCGAT CAACTCGTGG AACGTCACGA CGAACCTGCC GTCGGGGGTG
TCGGTGACCG GGTCGTGGAA CGCGGAGCGG ACCGGGACCA GCGGCGCGGT GCAGTGGCGG
AACGCCGCGT ACAACGGGAA GGTGGCGGCG GGGCAGTCGA CGGAGTTCGG GTTCCAGGGG
ACCGGGAGCG CGGGGACGCT GACGCCTGGT TGCACGGCGG GCTGA
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| Protein sequence | MKLTSRSVPR TALGAALLSV TTLGAALLVN APVAQAATTL GASAAESGRY FGAAVAAHKL
SDSVYTGILN SEFTSVTPEN EMKLDATEPT QGQFTYTSAD RIVAHAAARG MKVRGHTLAW
HSQQPGWMQS MEGAPLRSAM LNHVTQVATH YRGKIDSWDV VNEAFADGDG GGRRDSNLQR
TGNDWIEAAF RAARAADPGA KLCYNDYNTD DWTHAKTQAV YRLVQDFKTR GVPIDCVGFQ
SHFNPASPVP SNYQTTLENF AALGVDVQIT ELDIEGSGSA QASNYDRVTR ACLAVARCNG
ITVWGIRDTD SWRASGTPLL FDGSGNKKAA YTSVLAALNG GTTPPTSTTT TTTTPGGPAG
CTATVSLNSW NGGFVATVKV TAGSAAINSW NVTTNLPSGV SVTGSWNAER TGTSGAVQWR
NAAYNGKVAA GQSTEFGFQG TGSAGTLTPG CTAG
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