Gene Amir_2577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2577 
Symbol 
ID8326766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2911112 
End bp2912152 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content73% 
IMG OID644943119 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003100360 
Protein GI256376700 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.215831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGCGA ACCGCAGGAC CCCGCTGGAG CCGGGAGTGC GCCGCCGCGT CTCCATGGCC 
GACGTCGCCG CGCTCGCGGG GGTGTCCGCG CAGACCGTCT CCCGCGTCGC GAACGGCCAC
GCGAGCGTCG TCGGCAGCAC CCGCGAGCAG GTCCTCACCG CCATGCGGGA ACTGGGCTAC
CGCCCCAACA GCGCCGCGCG GGCGCTGAAG TACGGCGAGT TCCGCACCAT CGGCGTCATC
CTGTTCACCC TAGCCACGGT CGGCAACAGC CGCACCCTGG AGGCGATCGT CGCGCACTCG
GCCGCCGAGG GCTACGCGAT CACGCTCATC CCGGTCGCGG TGCCCACCCA GGACGGCGTG
CTGGGCGCGT TCACCAGGCT CGACGAGCTG GCCGTCGACG CGGTCATCGT GATCATGGAA
GTGCACCTGC TCGACGCCGC GACCGTGACC CTGCCGCCCG GTGTGCAGGT GATCGTCGTG
GACTCGAACG GCGGCGACCG CTACAACGTG GTCGACACCG ACCAGGCGCA CGGCGCCAGA
CTGGCCACCA GGCACCTGGT CGACCTGGGC CACCGCACCG TCTGGCACGT CGCGGGCCCC
GAGGAGTCCT TCGCGGCGGA GCGCCGGGCG CAGACGTGGC GCGAGACCCT GGAGGAGGCG
GGTCTTCCGG TGCCGCCGCT GCGCAGGGGC GACTGGTCGG CGGACTCCGG CTACCGGATC
GGCCTGGAGC TGGCCGAGGA ACCGGGCTGC ACGGCGGTGT TCGCGGCGAA CGACCAGATG
GCCCTGGGCC TGCTGCGGGC GTTCCACGCC AAGGGCAAGG TGGTGCCGCG CGACGTGAGC
ATCGTCGGCT TCGACGACCT CCCCGACGCG ACCTCCTACA TCCCGCCGCT GACCACGGTG
CACCAGGACT TCACCGAGGT GGGGCGGCGC TGCGTGGAAC GGGTCCTGCG CCAGGTCAGG
CACGAGCCGC AGGAGGTCGG CACGAGCCTG GTGCCGACCT GGCTGGTGCA CCGCGAGAGC
ACGGCGCCGC CACCCGCCTG A
 
Protein sequence
MSANRRTPLE PGVRRRVSMA DVAALAGVSA QTVSRVANGH ASVVGSTREQ VLTAMRELGY 
RPNSAARALK YGEFRTIGVI LFTLATVGNS RTLEAIVAHS AAEGYAITLI PVAVPTQDGV
LGAFTRLDEL AVDAVIVIME VHLLDAATVT LPPGVQVIVV DSNGGDRYNV VDTDQAHGAR
LATRHLVDLG HRTVWHVAGP EESFAAERRA QTWRETLEEA GLPVPPLRRG DWSADSGYRI
GLELAEEPGC TAVFAANDQM ALGLLRAFHA KGKVVPRDVS IVGFDDLPDA TSYIPPLTTV
HQDFTEVGRR CVERVLRQVR HEPQEVGTSL VPTWLVHRES TAPPPA