Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2577 |
Symbol | |
ID | 8326766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2911112 |
End bp | 2912152 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644943119 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003100360 |
Protein GI | 256376700 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.215831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTGCGA ACCGCAGGAC CCCGCTGGAG CCGGGAGTGC GCCGCCGCGT CTCCATGGCC GACGTCGCCG CGCTCGCGGG GGTGTCCGCG CAGACCGTCT CCCGCGTCGC GAACGGCCAC GCGAGCGTCG TCGGCAGCAC CCGCGAGCAG GTCCTCACCG CCATGCGGGA ACTGGGCTAC CGCCCCAACA GCGCCGCGCG GGCGCTGAAG TACGGCGAGT TCCGCACCAT CGGCGTCATC CTGTTCACCC TAGCCACGGT CGGCAACAGC CGCACCCTGG AGGCGATCGT CGCGCACTCG GCCGCCGAGG GCTACGCGAT CACGCTCATC CCGGTCGCGG TGCCCACCCA GGACGGCGTG CTGGGCGCGT TCACCAGGCT CGACGAGCTG GCCGTCGACG CGGTCATCGT GATCATGGAA GTGCACCTGC TCGACGCCGC GACCGTGACC CTGCCGCCCG GTGTGCAGGT GATCGTCGTG GACTCGAACG GCGGCGACCG CTACAACGTG GTCGACACCG ACCAGGCGCA CGGCGCCAGA CTGGCCACCA GGCACCTGGT CGACCTGGGC CACCGCACCG TCTGGCACGT CGCGGGCCCC GAGGAGTCCT TCGCGGCGGA GCGCCGGGCG CAGACGTGGC GCGAGACCCT GGAGGAGGCG GGTCTTCCGG TGCCGCCGCT GCGCAGGGGC GACTGGTCGG CGGACTCCGG CTACCGGATC GGCCTGGAGC TGGCCGAGGA ACCGGGCTGC ACGGCGGTGT TCGCGGCGAA CGACCAGATG GCCCTGGGCC TGCTGCGGGC GTTCCACGCC AAGGGCAAGG TGGTGCCGCG CGACGTGAGC ATCGTCGGCT TCGACGACCT CCCCGACGCG ACCTCCTACA TCCCGCCGCT GACCACGGTG CACCAGGACT TCACCGAGGT GGGGCGGCGC TGCGTGGAAC GGGTCCTGCG CCAGGTCAGG CACGAGCCGC AGGAGGTCGG CACGAGCCTG GTGCCGACCT GGCTGGTGCA CCGCGAGAGC ACGGCGCCGC CACCCGCCTG A
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Protein sequence | MSANRRTPLE PGVRRRVSMA DVAALAGVSA QTVSRVANGH ASVVGSTREQ VLTAMRELGY RPNSAARALK YGEFRTIGVI LFTLATVGNS RTLEAIVAHS AAEGYAITLI PVAVPTQDGV LGAFTRLDEL AVDAVIVIME VHLLDAATVT LPPGVQVIVV DSNGGDRYNV VDTDQAHGAR LATRHLVDLG HRTVWHVAGP EESFAAERRA QTWRETLEEA GLPVPPLRRG DWSADSGYRI GLELAEEPGC TAVFAANDQM ALGLLRAFHA KGKVVPRDVS IVGFDDLPDA TSYIPPLTTV HQDFTEVGRR CVERVLRQVR HEPQEVGTSL VPTWLVHRES TAPPPA
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