| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2569 |
|---|
| Symbol | |
|---|
| ID | 8326758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 2901624 |
|---|
| End bp | 2902307 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 644943111 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_003100352 |
|---|
| Protein GI | 256376692 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.392565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGG CGGTCGGGGT GGTGGTGCCC GCGCGCGACG AGGCGGGCAC GGTCGGCGAC
GCGGTGCGGG CGGCGCTGCG GGCGCTGGAG GCGTGCCCGG TGCGGTCGGT GGTGTGCGTG
GTGGCCGACC GGTGCGCCGA CGACACCGCC GGGCTCGCCC GCGCGGCCGG GGCCGTCGTG
CTGGAGCAGC GCGCGGAGCT GGCGCTCGGG CAGGTGCGGG ACCTCGGGAC GCGGCACGCG
CTCGCGCTGC TGGGCGGCGA CCCGGCGCGC ACGTGGCTGC TGGGCAGCGA CGCGGACAGC
GTCGTCGGGC CGGACTGGGT GACGCGGCAC CTGGCGCACG CGGCGGAGGG CGCCGACGTG
GTGACCGGGC GGGTGGAGGT GGTGGGGCTG GAGGCGGAGC TGTCCCGGCG CTACCGGGGT
TTCCTCGCCC GCGAGACCCG GACTCCGGTG CACGGGGCCG ACTTCGGGGT GCGGGGGAGC
GCTTTCCTCG CGGTGGGCGG GTACCGGCCG CTGAGCAGCG GCGAGGACCG GGACCTGTGG
TGGCGTCTGG TCGCGGCCGG GTTCCGGGCC GCGCAGTCGA CCGACGTGGT GGTGCGGACC
AGCGGCCGGG TGGTCGGCCG GGCGCGCGGC GGCGTCGCCG ACCTGCTGGC CGACCTGCGC
GCGGGGGCCG AGGAAGTCGG CTGA
|
|---|
| Protein sequence | MIEAVGVVVP ARDEAGTVGD AVRAALRALE ACPVRSVVCV VADRCADDTA GLARAAGAVV
LEQRAELALG QVRDLGTRHA LALLGGDPAR TWLLGSDADS VVGPDWVTRH LAHAAEGADV
VTGRVEVVGL EAELSRRYRG FLARETRTPV HGADFGVRGS AFLAVGGYRP LSSGEDRDLW
WRLVAAGFRA AQSTDVVVRT SGRVVGRARG GVADLLADLR AGAEEVG
|
|---|
| |