Gene Amir_2565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2565 
Symbol 
ID8326754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2897414 
End bp2898508 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content76% 
IMG OID644943107 
Productalanine racemase domain protein 
Protein accessionYP_003100348 
Protein GI256376688 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.153801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCGC CCACCCCGCA CCTGCGCCTG GACCGCGAGG TCCTGCGGCG CAACGCCGAC 
CGGTTGCGCG CCAGGATCAC CGCGCTGGGA CCGGTGCTGC GCCCGCACGT GAAGACCTCG
AAGTCCCCCA GGGTCGCGGA GGTGCTGCTC GGCGGCGCGC CCGGCCCGAT CACGGTGTCG
ACGCTGCGCG AGGCCGAGGT GTTCGCCGAC GCCGGGTACG ACGACGTCCT GTACGCGGTG
GGCATCGCAC CGTCCAAGCT GGACCGGGTG CGCGCGCTGC GCGAGCGCGG CGTGGACCTG
GTGGTGCTGC TGGACAGCGT CGAGCAGGCG GAGGCCGTTG CGGGGCAAGG GGTTCCGGCG
CTGCTGGAGG TGGACTGCGA CGGGCACCGG GGCGGGGTGC CGCCGGACTC CCCCGCGGTG
CTGGAGATCG CGGGCGTGCT GGGCGGGGAC CTGCTGCGCG GGGTGCTGAC CCACGCGGGC
GAGTCGTACT TCCGGTACAC CCCCGAGGAG CTGGCGCTGG CCGCCGAGCA CGAGCGCGCC
ACCGCCGTGC GGGTCGCGGA GGCCTTGCGC GCAGGCGGCT TCCCCTGCCC GGTGGTGAGC
GTCGGCTCGA CCCCGACGGC GCACGCCGCG CGCGACCTGA CCGGCGTGAC GGAGGTCCGC
GCGGGCAACT ACGCGTTCTT CGACCTGGTC ATGGCGGGCG TCGGCGTGTG CGGGCTGGCG
GACCTGGCGC TGTCCGTGGT GGTCACCGTG ATCGGGCACC GGCGGGAGCG CGGCTGGATC
ATGACCGACG GCGGCTGGAT GGCGACCTCC CGCGACCGGG GCACCGGGGT GCAGGCGGTG
GACCAGGCGT ACGGCGTGGT GGCGCTGGAG GACGGCGGCG TGGTGCCGGA CCTGCTGATG
GTGGGCGCCT CCCAGGAGCA CGGGGTGCTG GGGATGCGCG AGGGCAGCGC CCGCGAGCTG
CCGGACTTCC CGGTGGGCAC GAGGTTGCGC GTGCTGCCCG TGCACGCCTG CGCGACGGCG
GCCCAGCACG GCGAGTACCA CGTGGTCGGC GGCGGGCGGG CGCCCGAGGT GTGGGCGCGG
GTGACCGGGT GGTGA
 
Protein sequence
MTPPTPHLRL DREVLRRNAD RLRARITALG PVLRPHVKTS KSPRVAEVLL GGAPGPITVS 
TLREAEVFAD AGYDDVLYAV GIAPSKLDRV RALRERGVDL VVLLDSVEQA EAVAGQGVPA
LLEVDCDGHR GGVPPDSPAV LEIAGVLGGD LLRGVLTHAG ESYFRYTPEE LALAAEHERA
TAVRVAEALR AGGFPCPVVS VGSTPTAHAA RDLTGVTEVR AGNYAFFDLV MAGVGVCGLA
DLALSVVVTV IGHRRERGWI MTDGGWMATS RDRGTGVQAV DQAYGVVALE DGGVVPDLLM
VGASQEHGVL GMREGSAREL PDFPVGTRLR VLPVHACATA AQHGEYHVVG GGRAPEVWAR
VTGW