Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2565 |
Symbol | |
ID | 8326754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2897414 |
End bp | 2898508 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644943107 |
Product | alanine racemase domain protein |
Protein accession | YP_003100348 |
Protein GI | 256376688 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.153801 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCGC CCACCCCGCA CCTGCGCCTG GACCGCGAGG TCCTGCGGCG CAACGCCGAC CGGTTGCGCG CCAGGATCAC CGCGCTGGGA CCGGTGCTGC GCCCGCACGT GAAGACCTCG AAGTCCCCCA GGGTCGCGGA GGTGCTGCTC GGCGGCGCGC CCGGCCCGAT CACGGTGTCG ACGCTGCGCG AGGCCGAGGT GTTCGCCGAC GCCGGGTACG ACGACGTCCT GTACGCGGTG GGCATCGCAC CGTCCAAGCT GGACCGGGTG CGCGCGCTGC GCGAGCGCGG CGTGGACCTG GTGGTGCTGC TGGACAGCGT CGAGCAGGCG GAGGCCGTTG CGGGGCAAGG GGTTCCGGCG CTGCTGGAGG TGGACTGCGA CGGGCACCGG GGCGGGGTGC CGCCGGACTC CCCCGCGGTG CTGGAGATCG CGGGCGTGCT GGGCGGGGAC CTGCTGCGCG GGGTGCTGAC CCACGCGGGC GAGTCGTACT TCCGGTACAC CCCCGAGGAG CTGGCGCTGG CCGCCGAGCA CGAGCGCGCC ACCGCCGTGC GGGTCGCGGA GGCCTTGCGC GCAGGCGGCT TCCCCTGCCC GGTGGTGAGC GTCGGCTCGA CCCCGACGGC GCACGCCGCG CGCGACCTGA CCGGCGTGAC GGAGGTCCGC GCGGGCAACT ACGCGTTCTT CGACCTGGTC ATGGCGGGCG TCGGCGTGTG CGGGCTGGCG GACCTGGCGC TGTCCGTGGT GGTCACCGTG ATCGGGCACC GGCGGGAGCG CGGCTGGATC ATGACCGACG GCGGCTGGAT GGCGACCTCC CGCGACCGGG GCACCGGGGT GCAGGCGGTG GACCAGGCGT ACGGCGTGGT GGCGCTGGAG GACGGCGGCG TGGTGCCGGA CCTGCTGATG GTGGGCGCCT CCCAGGAGCA CGGGGTGCTG GGGATGCGCG AGGGCAGCGC CCGCGAGCTG CCGGACTTCC CGGTGGGCAC GAGGTTGCGC GTGCTGCCCG TGCACGCCTG CGCGACGGCG GCCCAGCACG GCGAGTACCA CGTGGTCGGC GGCGGGCGGG CGCCCGAGGT GTGGGCGCGG GTGACCGGGT GGTGA
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Protein sequence | MTPPTPHLRL DREVLRRNAD RLRARITALG PVLRPHVKTS KSPRVAEVLL GGAPGPITVS TLREAEVFAD AGYDDVLYAV GIAPSKLDRV RALRERGVDL VVLLDSVEQA EAVAGQGVPA LLEVDCDGHR GGVPPDSPAV LEIAGVLGGD LLRGVLTHAG ESYFRYTPEE LALAAEHERA TAVRVAEALR AGGFPCPVVS VGSTPTAHAA RDLTGVTEVR AGNYAFFDLV MAGVGVCGLA DLALSVVVTV IGHRRERGWI MTDGGWMATS RDRGTGVQAV DQAYGVVALE DGGVVPDLLM VGASQEHGVL GMREGSAREL PDFPVGTRLR VLPVHACATA AQHGEYHVVG GGRAPEVWAR VTGW
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