Gene Amir_2557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2557 
Symbol 
ID8326746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp2886075 
End bp2886635 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content76% 
IMG OID644943099 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100340 
Protein GI256376680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGACC CCGACCAGCG CCCGCTGCGG GCCGACGCCC AGCGCAACCG CGACAAGCTC 
CTGGCCGCCG CGCTGGCCGC GTTCACCGAG CGCGCCGACG CGCCCCTGGA GGGCATCGCG 
AAGCAGGCGG GCGTGGGCAT CGGCACCCTC TACCGGCACT TCCCGACCCG CGAGGCGCTC 
ATCGAGCAGG TGTACCGGGC CGAGCTGGAC CGGCTGTGCG ACGCCGCGCC GCACCTGCTG 
ACCACCTCGC CGCCCGAGGT CGCGCTGCGG CGGTGGATGG ACCTGTTCCT GGAGTACCTG 
GCCACCAAGC GAGGGCTCGC CGACGCGCTG CGCGCGGTGA TCACCGGCGC GGAGACCCCG 
TTCCCGCACG CCAGGAAGCG GCTGCTGGAC GCGCTGAGCG TGCTGGTGGA CGCGGCGGTG 
CGGACGGGCG CGCTGCGCGA CGACGTGCCC GCGCTGGACG TGCTGGTGGG CATGGCCGGG 
ATCGCGAACG CCACCGACGA CGCGGCGCAG GCGGGGCGGC TGCTGGACCT GCTCGTGGCC 
GGGCTGCGCG CCGGGCGGTG A
 
Protein sequence
MTDPDQRPLR ADAQRNRDKL LAAALAAFTE RADAPLEGIA KQAGVGIGTL YRHFPTREAL 
IEQVYRAELD RLCDAAPHLL TTSPPEVALR RWMDLFLEYL ATKRGLADAL RAVITGAETP 
FPHARKRLLD ALSVLVDAAV RTGALRDDVP ALDVLVGMAG IANATDDAAQ AGRLLDLLVA 
GLRAGR