| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2534 |
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| Symbol | |
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| ID | 8326723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2855727 |
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| End bp | 2856941 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644943076 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003100317 |
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| Protein GI | 256376657 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.478006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCCTT CCACCCGCCA CGCCGTCCTG CGCGCGCTGG TCCCGCTCCT GCTCCTGACC
TGCCTCCCCG GCTGCGCCCC GCCCGCCGAC CGCACCCTCG TGCGCGTCCT CGGCCCGTGG
ACCGGAGCCG AGGAGGACCG GTTCCGCGCC GTGCTCGACC GGACCGGAGT GCCCTACGAC
TACACCGGCA GCCGCGCCCT CGGCCAGCTG CTGCGCTCCA GGGTGCAGCA GGGCGACCCG
CCCGACGTCG CCGTCCTGCC CGGCCTCGGC GAGCTGGCCG ACTACGCGCG GGGCGGCTAC
CTGCGCGAAC TGCCCTCGCT GCCCGAGGCC GACTACGCGC CCCTCTGGCG GGACGTGGCG
CGCGTGGGCG CCGAGGGCAC GCACGCCGTC GTCGTCAAGG CCGACCTCAA GAGCCTCATC
TGGTTCGACC CCGGCTCGGA CGTGCGCCCG CCCGCGAACG CCGAGCAGCT CCTGGCGGAC
GGCGCGCCGT GGTGCCTGGG TCTCGGCTCG TCGCCGGACG CGGGCTGGCC GGGCACCGAC
TGGGTCGAGG ACCTGCTGCT GCACCGGTCC GGCCCCGAGG TCTACCGGCG GTGGGCCTCC
GGGGAGCTCG CCTGGAGCTC ACCGGAGGTG CGCGGGGCCT GGCAGACCTG GGGCGCGCTG
GTGTCCGGCG TCCCCGCCGA GCGGGCGCTG CTCACCGACT TCGACGACGC GGGCCTGGCC
ATGTTCACCC GGCCCCAGGG CTGCGGGCTC GACCACCTCG GCTCGTTCGC GGGCGCCGTC
TACCGGGAGC GCGGGCACCG CGGCGACTTC GCCCCCTTCC CCGACCTGGG CGCGAGCGGC
TGGGAGGTGT CCGCCGACCT GGCCGGGCTC TTCACCGACT CGCCCGCCGC GCGCAGGCTC
CTGACGCACC TGGCGGACGC CGAGGGCCAG CGGGTCTGGC CCGCTGCGGG CGGTGCATAC
TCCGCCCACA AACGGGTACC CCCCTCCGGC TACGCCGATC CGGTGGACCG GCGGATCGCC
GAAGTCCTCA CCGAGGGCGC GTCCCTGTGC CTCGACGCCT CGGACCTCAT GCCCCCGAGC
CTGCGCTCCG CCTTCTACCG GGGCGTAATC AACTACCTCG AAGCCCCGGA GTCCCTCGAC
GGGGTGCTGG ACGGTCTCGA CCACATCGCC GATTCGGTCG ACCGAACGGA GTGGATTACG
CTACCTTGCG GCTGA
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| Protein sequence | MSPSTRHAVL RALVPLLLLT CLPGCAPPAD RTLVRVLGPW TGAEEDRFRA VLDRTGVPYD
YTGSRALGQL LRSRVQQGDP PDVAVLPGLG ELADYARGGY LRELPSLPEA DYAPLWRDVA
RVGAEGTHAV VVKADLKSLI WFDPGSDVRP PANAEQLLAD GAPWCLGLGS SPDAGWPGTD
WVEDLLLHRS GPEVYRRWAS GELAWSSPEV RGAWQTWGAL VSGVPAERAL LTDFDDAGLA
MFTRPQGCGL DHLGSFAGAV YRERGHRGDF APFPDLGASG WEVSADLAGL FTDSPAARRL
LTHLADAEGQ RVWPAAGGAY SAHKRVPPSG YADPVDRRIA EVLTEGASLC LDASDLMPPS
LRSAFYRGVI NYLEAPESLD GVLDGLDHIA DSVDRTEWIT LPCG
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