Gene Amir_2523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2523 
Symbol 
ID8326712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2839358 
End bp2841013 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content71% 
IMG OID644943066 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003100307 
Protein GI256376647 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.76417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAC CCGCCACCAC GGCGGACACC CGGCACCCCC AACCGGGCGA ACCGATGAAC 
CACCGGCAGA TCATGGAGGC CCTCAGCGGC CTGCTGCTCG TCCTGTTCGT CGCGATGCTC
AGCGGCACGG TGGTCTCCAC CGCCCTGCCG CAGATCATCG GCGCTCTGGA GGGGACGCAG
ACCCAGTACA CCTGGGTCGT CACCGCGACC CTGCTGACCG CCACCGCGAG CACCCCGATC
TGGGGCAAGC TGGCGGACCT GTTCAACAAG AAGACGCTCG TCCAGTCGGC GATCGTGCTG
TTCATCATCG GTTCGGTGAT CAGCGGTTTC GCGCAGAGCG CCGGTCAGCT GATCGCCGCC
CGCGCGTTCC AGGGCATCGG CGTCGGCGGC CTGCAGGCGC TGGTGCAGGT GGTCATCGCC
GCGATGATCC CGCCCCGCGA GCGCGGCCGG TACAACGGCT ACCTGGGCGG CGTGATGGCG
CTGGCCACGG TCGGCGGGCC GCTGCTCGGC GGGCTGATCG TGGACACCTC GTGGCTGGGC
TGGCGCTGGT GCTTCTTCGT CGGCGTCCCG GTCGCCGTGG TGGCGCTGCT GGTGCTCCAG
GCGACGCTGA AGGTGCAGAC CGCGCGCCGG GAGAACGTCA AGATCGACTA CCTGGGCGCC
GGCCTGATCG CGGCGGGCGT GAGCGTGCTG CTGATCTGGA TCTCGTTCGT GGACAGCTCG
TTCGACTGGA TCTCCTGGCA GAGCGGCGCG ATGGTCGGCG GCTCGGTCCT GCTCCTGGGC
CTGGCGGTGC TGGTCGAGCA CAAGGCGTCC GAGCCGGTGG TCCCGCCGAA GATCGTGAAG
GACCGCACGA CGGCGCTCGC GATCCTGGCG AGCCTCGCGG TGGGCATGGC GATGTTCGGC
GGCGCGGTGT TCCTCGGCCA GTACTTCCAG ATCGGCCGGG GCTACTCCCC CACCGAGGCC
GGACTGCTGA CCATCCCGAT GATGGCGGGC GTGCTGGGCG CGTCGATCAT CTCCGGGCGC
ATGATCACCC GCAGCGGCAA CGTGAAGCCG TACATCGTCA CCGGCGCCGT GGTGCTGGTC
ATCGGGTTCC TGGCGCTGGG CACGATCGAC CACCAGACCT CGCTGGTGCT GGTCGGCGCG
GCGATGCTGC TGGTCGGCAC GGGCGTCGGC ATGTCGATGC AGAACCTGGT GCTGGCGGTG
CAGAACACCG TGCAGCTCAA GGACATCGGC GCGGCCAGCT CCACGATCGC GTTCTTCCGC
TCGCTCGGCG GCACGATCGG CGTGTCGGTG CTGGGCGCGG TGCTGGCCAG GCAGGTCAGC
GAGCAGATCA CCCGCGACCT GACCGCGGCG GGCGTGCCCG CGTCGGCGTC GGGCAGCGCC
GGGGGCAGCC TGAACATCTC GGCGCTGCCG GGCCCGATCC AGGAGATCGT GCGCGCGGCG
TACGGGGACG CGACCGGGCA CATCTTCCTG ATCGCGGCGG CGATCGGCGT GGTGGGCGTG
ATCGCGGCGG CGATGCTGAA GCCCGCGAAG CTGCGCTCCA GCCTGGACCT GGGCGAGACC
ACGAAGGCCG TGGCGCCGGA GGCGGCGCCG CAGGGCAAGG CCGTGACCGG CGGTGACGTG
GTCGGCGGCG AGTCGCTGAC GAAGTCGCGG CGGTAA
 
Protein sequence
MSAPATTADT RHPQPGEPMN HRQIMEALSG LLLVLFVAML SGTVVSTALP QIIGALEGTQ 
TQYTWVVTAT LLTATASTPI WGKLADLFNK KTLVQSAIVL FIIGSVISGF AQSAGQLIAA
RAFQGIGVGG LQALVQVVIA AMIPPRERGR YNGYLGGVMA LATVGGPLLG GLIVDTSWLG
WRWCFFVGVP VAVVALLVLQ ATLKVQTARR ENVKIDYLGA GLIAAGVSVL LIWISFVDSS
FDWISWQSGA MVGGSVLLLG LAVLVEHKAS EPVVPPKIVK DRTTALAILA SLAVGMAMFG
GAVFLGQYFQ IGRGYSPTEA GLLTIPMMAG VLGASIISGR MITRSGNVKP YIVTGAVVLV
IGFLALGTID HQTSLVLVGA AMLLVGTGVG MSMQNLVLAV QNTVQLKDIG AASSTIAFFR
SLGGTIGVSV LGAVLARQVS EQITRDLTAA GVPASASGSA GGSLNISALP GPIQEIVRAA
YGDATGHIFL IAAAIGVVGV IAAAMLKPAK LRSSLDLGET TKAVAPEAAP QGKAVTGGDV
VGGESLTKSR R