| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2504 |
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| Symbol | |
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| ID | 8326693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2801278 |
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| End bp | 2802510 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 644943047 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003100288 |
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| Protein GI | 256376628 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGAGG GCCTGTGGCG CGACCTCGCG CCGCAGGCCC TCGCCAGGCT GCTGCGCGCG
CACGGCCGCG CCGGGTTCGA CCTGTGCGAG GACGCCGTCC AGGAGGCGCT GCTCCAGGCG
CACCGCCAGT GGCCGGGGCG CTTCCCCGAC GACCCGCTGG CCTGGCTCGT CGCGGTGGCC
CGCCGCCGGT ACGCCGACCA CGCGCGCGGG GACGCCAGGC GGCGCTCGCG CGAGGCGCGC
GCGGCCCTGC TCGCCCCGGA GCCGCCGCAG GCCGGGCAGG ACGACGACTC GCTGCTGGTG
CTCCTCATGT GCTGCCACCC CGGCCTGCCC CGCTCGGGCC AGGTCGCGCT GACCCTCAGG
GCCGTGGCCG GGCTGAGCAC CGCGCGGATC GCGAACGTCT ACCAGCTGCC CGAGCCGACC
ATCGCCCAGC GGATCACCCG CGCCAAGCGC AAGGTCGCCG AGCTGGGCCT GCCGCCGCCG
GGGCCCGCCG ACGAGCGGGT GACCCCGGTG CTCGACGTGC TGTACGTGAT GTTCACCGAG
GCGCACCACA CCACCACCGG CGCGCCGCCC CGCGACGCCG ACCTGGCGGC CGAGGCGATC
CGCCTGGCCA GGCTGCTGCT GCGCGCCGTG CCGTCGTCGG CGGAGGTCGC CGGGCTGCTC
GCGCTGATGC TGCTCACCGA GGCCAGGCAC CCGGCGCGCG TCGGCCCGGA CGGCGCCCTG
GTGCCGCTGG ACGAGCAGGA CCGCGCCCTC TGGGACCGGT CCCTGATCCG GGAGGGCGCC
GCGCTGGTCG ACCGCGCGGT CCGGGGCGCC CGGCCCGGCC CGTACCTGCT CCAGGCGTGC
GTCGCGGCGC TGCACGCCGA GGCGGCCAGC GCGGAGGCGA CGGACTGGGG CGAGGTGCTG
GCGCTGTACC GGGTGCTGGA GGCGGTGACC GGGCGGGGGA ACCCGACGAT CACCCTCAAC
CGGGTGGTGG CGCAGGCGGT GGTGGACGGG AGCGCGGTCG CGCTGGGCGA GCTGGACGCG
CTCGCGGCCG AGCACCCCCG GCTGCCCCGG CTCGACGCCG TGCGCGCCCA CGTGCTGGAG
CAGGCCGGGC GCGCGGGGGA GGCGGCGGAC GCGTACCGGC GGGCCATCGC GGTGACCACG
AACCTCGCCG AGCAGCGGCA CCTCAGGCGG CGGCTGCTCG GGGTGGCGAC CGCCGGGGTG
CCCGCCGGGG TGACGGGGGC GACTACTTCT TGA
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| Protein sequence | MAEGLWRDLA PQALARLLRA HGRAGFDLCE DAVQEALLQA HRQWPGRFPD DPLAWLVAVA
RRRYADHARG DARRRSREAR AALLAPEPPQ AGQDDDSLLV LLMCCHPGLP RSGQVALTLR
AVAGLSTARI ANVYQLPEPT IAQRITRAKR KVAELGLPPP GPADERVTPV LDVLYVMFTE
AHHTTTGAPP RDADLAAEAI RLARLLLRAV PSSAEVAGLL ALMLLTEARH PARVGPDGAL
VPLDEQDRAL WDRSLIREGA ALVDRAVRGA RPGPYLLQAC VAALHAEAAS AEATDWGEVL
ALYRVLEAVT GRGNPTITLN RVVAQAVVDG SAVALGELDA LAAEHPRLPR LDAVRAHVLE
QAGRAGEAAD AYRRAIAVTT NLAEQRHLRR RLLGVATAGV PAGVTGATTS
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