Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2483 |
Symbol | |
ID | 8326672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2766687 |
End bp | 2768600 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644943028 |
Product | hypothetical protein |
Protein accession | YP_003100269 |
Protein GI | 256376609 |
COG category | [R] General function prediction only |
COG ID | [COG3889] Predicted solute binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000855708 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCGCGC TCGCCTCGGG CGTCGCCGCG ACGCAGGTCC GCCCGGCGCT CGCCGAGCCG AGCGCGGTCG TCAACCCGGT GCGCACGGTC GACCCCTCCG ACGTCTACCG CGACCCGGCC CACGGCTTCA TCGTCCTCGT CGAGCAGGAC GCCAGCCTCC GCGAGAACGA GGTCGAGGGC CCGGTCGCGA TCGGCGGGAA CCTCAGCTTC CGCGACTTCC GCGCAGGCTC CAACCACCCC GGCGCCTACG TCCTCCCCGG TGACGCCCAA CCGACCAGCC TCGTCGTCGG TGGCCGCCTC GACTACGCCG CCAGCACCCC CACCGCCCGC TTCGACCTGC TCAACGCGTC CTACGCGAAG TTCGGCGACC TCTCCAACGC CACCGCCGTC GAGAACGTCA GCACCACCGA CATCGTCCCC GCAGGCCGCC CCGCCCCCGT CCTCCAGGTC CACACCCCCC AACCCGCGGC CTCGCTCACC CGCCCCTCGG GCTTCGACCT CCCCGCCCTC TTCACCACCT ACCGCAAGCT CAACGCGGGC ATGGCCGCCT GCCCGTCCAC CGCCGTCCTG CGCGACCAGA ACGGCCAGAA CCCGTGGAAC GGCGAGGACC CCACCGCGAC CCTCGGCCTG CGCCCAGGCC AGAACGTCCT CACCCTCACC CCCGACCAGC TCGACAAGCT GGCCACCCTC AACCCCCTCG CCAGCTACAA CCAACCCGGC GACGGAAGCG GCGCCTGGCT GATCGTGAAC GTGCCCTTCA CCGGCGACCG CGCGCTCCAC CTGCCGAACG TCACCTGGCA GGGCAACTCC GCGTCCAGGC ACGTCCTGTG GAACTTCACC ACCACCGGCA CCCTCACCCT CCCCCCGGAG ACCGGCACCC TCTGGGGAAC CCTGTACGCC CCGAACGCGC ACGTCCTCGA CCTGAGCCCC GGCAACGTCG AGGGCGACCT GATCGCCCGA ACCCTGACGA TGGGCGGCCC GGACTCCGGG AGCGGCGGCG AGGTCCACCA CGCGCCCTTC CAGGAGGTGG TCACCACCTG CGCGACCACC ACCGATGCGC CGTCGACCAC GACGGACCTG CCGTCGACCA CGACGGACCT GCCTGTCACC ACGGACGCTC CCACCACGAC GGACGCTCCC ACCACGGATC TGCCCGTCAC CAGCACCACG GACGTGCCTG CCCCGCAGCC CCCGACAACG GGTCAACCGC CTGCCGAACC GACCTCCACC ACAACCAGCA CGCCCCTGAG CACCTCGACC ACCGCGCCCA CCCCGACCAC CCCAACCACC CCGTCCGCCG CACCACCCGC CACAACCGAG CCGCCACCGT CGCCCACGAC CACCACCACC ACCACGTCAC CAACCACCAC CACCGGGCCT CCAACCACCA CAGGTCAAGC CCTCACCCCC ACCACCATCA CCACAACCGC CGCCCCGGTC CCCGCCCCCA CAACCACAGC CACCACCACG ACCAAGCACC TGATCCCCCC GAGAACCTCG TTCAAGGGCG GCCTCATCAC AGCTCCGGGC CTGATCGACC CGGTGACCAT CGACCCGATC GTCACCGACC CGCCCACCAC CGACCCCACA ACCACAGACC CCACAACCAC AGACCCCACA ACCACCACCA CCCAGCCGCC GACCTCCATC AGCGACCCGA CCCCACCCAC CACCTCACCC CCCACGACAA CCGGCAAGCC CCCGGCGAAC CCCATGGGCA CCCCGGACCC ACCCACCCCC ACCACGCCCG CGACCGCCGC CCCCGTCACT GCCGAACAAG CAACCGCACC CCCCACTCAC CCCCTGGCAG GCACAGGCTC CCCCGCAGCG ACACTCCTGG GCCTAGCCGC CACCCTCCTC ATCACAGGCG CGGCCCTGAC CGCCCTGGAC CGCACCAGAA CCCCCAAGCC CTAA
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Protein sequence | MLALASGVAA TQVRPALAEP SAVVNPVRTV DPSDVYRDPA HGFIVLVEQD ASLRENEVEG PVAIGGNLSF RDFRAGSNHP GAYVLPGDAQ PTSLVVGGRL DYAASTPTAR FDLLNASYAK FGDLSNATAV ENVSTTDIVP AGRPAPVLQV HTPQPAASLT RPSGFDLPAL FTTYRKLNAG MAACPSTAVL RDQNGQNPWN GEDPTATLGL RPGQNVLTLT PDQLDKLATL NPLASYNQPG DGSGAWLIVN VPFTGDRALH LPNVTWQGNS ASRHVLWNFT TTGTLTLPPE TGTLWGTLYA PNAHVLDLSP GNVEGDLIAR TLTMGGPDSG SGGEVHHAPF QEVVTTCATT TDAPSTTTDL PSTTTDLPVT TDAPTTTDAP TTDLPVTSTT DVPAPQPPTT GQPPAEPTST TTSTPLSTST TAPTPTTPTT PSAAPPATTE PPPSPTTTTT TTSPTTTTGP PTTTGQALTP TTITTTAAPV PAPTTTATTT TKHLIPPRTS FKGGLITAPG LIDPVTIDPI VTDPPTTDPT TTDPTTTDPT TTTTQPPTSI SDPTPPTTSP PTTTGKPPAN PMGTPDPPTP TTPATAAPVT AEQATAPPTH PLAGTGSPAA TLLGLAATLL ITGAALTALD RTRTPKP
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