Gene Amir_2477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2477 
Symbol 
ID8326666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp2748907 
End bp2749524 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content71% 
IMG OID644943022 
Productisochorismatase hydrolase 
Protein accessionYP_003100263 
Protein GI256376603 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0529331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTCCC AGCTCGCGCT CGACCCGGCG AGGACCGCCG TGGTGCTGAT CGAGTACCAG 
AACGACTTCA CCAGCCAGGG GGGCGCGCTG CACGACGCCG TCGCGCCCGT CATGGCCGAC 
ACCGGGATGC TGCCGAAGAC CGTCGAGCTG GTCGACGCGG CCCGCGCGGC GGGCGCGGTG 
GTCATGCACA CGCCCATCGC GTTCGCCGAG GGCTACCACG AGATCACCGC CACCCCGTAC 
GGCATCCTCA AGGGCGTCGT GGACGGGAAG GCGTTCGTGC GGGGGAGCTG GGGCGCGGCG 
ATCGTCGACG ACCTCGCGCC GCGCGCGGGC GACATCGTCG TGGAGGGCAA GCGCGGGCTG 
GACGCGTTCG CCAGCACCAA CCTGGACTTC ATGCTCCGCA GCAAGGGGAT CACCGACGTC 
GTGCTCGGCG GGTTCCTGAC GAACTGCTGC GTCGAGTCGA CCATGCGCAC CGCCTACGAG 
AGCGGCTACC GGGTGCACAC GGTCACCGAC TGCGTCGCCG CGACCTCGCG CGCCGAGCAC 
GAGAACGCGA TCCGCTTCGA CTACCCCATG TTCTCCCTGC CGGTGGTGGC GCGCGACGTC 
GTCGGCGCCT GGGGGTAG
 
Protein sequence
MSSQLALDPA RTAVVLIEYQ NDFTSQGGAL HDAVAPVMAD TGMLPKTVEL VDAARAAGAV 
VMHTPIAFAE GYHEITATPY GILKGVVDGK AFVRGSWGAA IVDDLAPRAG DIVVEGKRGL 
DAFASTNLDF MLRSKGITDV VLGGFLTNCC VESTMRTAYE SGYRVHTVTD CVAATSRAEH 
ENAIRFDYPM FSLPVVARDV VGAWG