Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2477 |
Symbol | |
ID | 8326666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2748907 |
End bp | 2749524 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644943022 |
Product | isochorismatase hydrolase |
Protein accession | YP_003100263 |
Protein GI | 256376603 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0529331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCTCCC AGCTCGCGCT CGACCCGGCG AGGACCGCCG TGGTGCTGAT CGAGTACCAG AACGACTTCA CCAGCCAGGG GGGCGCGCTG CACGACGCCG TCGCGCCCGT CATGGCCGAC ACCGGGATGC TGCCGAAGAC CGTCGAGCTG GTCGACGCGG CCCGCGCGGC GGGCGCGGTG GTCATGCACA CGCCCATCGC GTTCGCCGAG GGCTACCACG AGATCACCGC CACCCCGTAC GGCATCCTCA AGGGCGTCGT GGACGGGAAG GCGTTCGTGC GGGGGAGCTG GGGCGCGGCG ATCGTCGACG ACCTCGCGCC GCGCGCGGGC GACATCGTCG TGGAGGGCAA GCGCGGGCTG GACGCGTTCG CCAGCACCAA CCTGGACTTC ATGCTCCGCA GCAAGGGGAT CACCGACGTC GTGCTCGGCG GGTTCCTGAC GAACTGCTGC GTCGAGTCGA CCATGCGCAC CGCCTACGAG AGCGGCTACC GGGTGCACAC GGTCACCGAC TGCGTCGCCG CGACCTCGCG CGCCGAGCAC GAGAACGCGA TCCGCTTCGA CTACCCCATG TTCTCCCTGC CGGTGGTGGC GCGCGACGTC GTCGGCGCCT GGGGGTAG
|
Protein sequence | MSSQLALDPA RTAVVLIEYQ NDFTSQGGAL HDAVAPVMAD TGMLPKTVEL VDAARAAGAV VMHTPIAFAE GYHEITATPY GILKGVVDGK AFVRGSWGAA IVDDLAPRAG DIVVEGKRGL DAFASTNLDF MLRSKGITDV VLGGFLTNCC VESTMRTAYE SGYRVHTVTD CVAATSRAEH ENAIRFDYPM FSLPVVARDV VGAWG
|
| |