Gene Amir_2448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2448 
Symbol 
ID8326637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp2719922 
End bp2720512 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content70% 
IMG OID644942993 
Productprotein of unknown function UPF0016 
Protein accessionYP_003100234 
Protein GI256376574 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.848775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCAG CACTCGTCAG CACCGCCGTG TCGTTCGGCG TCATCTTCGT CGCCGAGTTG 
GGCGACAAGT CCCAGCTCAT GGCGCTCACC TTCGCCACCC GCTTCAAGGT CTGGCCGGTG 
CTCCTGGGCA TCACGCTGGC CACGGCGATC GTGCACCTCG CCTCGGTCGC CATCGGCTTC 
GGCCTCGGCG CCGCCCTCCC CACCGGCTGG ATCAACCTGG CCGCCGCGAT CGCGTTCGTG 
GTCTTCGGCT TCTGGACGCT GCGCGGCGAC TCGCTCACCG ACGACGAGAA GTCCAAGGCG 
CAGAACGTGA CCCGCTCCGC GGTGATCGCG GTCGGCACCG CGTTCTTCCT CGCCGAGCTG 
GGCGACAAGA CCATGCTCGC CACCATCACC CTGGCCACCG ACCACGGCTG GTTCGGCGTG 
TGGGTCGGCT CCACGCTCGG CATGGTCGCG GCGGACGCGC TGGCCATCGT GGTCGGCCGG 
GCGCTGGGCA AGGCGCTGCC GGAGAAGACC ATCAGGTACG GCGCGTCGGC GCTGTTCTTC 
CTCTTCGGCA TCTGGCTCGC GGTCGAGGCC GTCCTGGAGC TCACGCGCTG A
 
Protein sequence
MDAALVSTAV SFGVIFVAEL GDKSQLMALT FATRFKVWPV LLGITLATAI VHLASVAIGF 
GLGAALPTGW INLAAAIAFV VFGFWTLRGD SLTDDEKSKA QNVTRSAVIA VGTAFFLAEL 
GDKTMLATIT LATDHGWFGV WVGSTLGMVA ADALAIVVGR ALGKALPEKT IRYGASALFF 
LFGIWLAVEA VLELTR