Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2443 |
Symbol | |
ID | 8326632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2713910 |
End bp | 2714599 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644942988 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003100229 |
Protein GI | 256376569 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0220439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACTCCC AGTTGCCCAC CGCTCAGGCG CACGTGGACG AGGCGCCCGC AGCGCTGGCG CCCGCGGAGC AGGCGCCCGC GGAGCGGTTG CGGGCCGACG CGCGGGACAA CCGCGACCGC ATCCTGGTCA CCGCCCGCGA GGTGTTCGCG AGCCGTGGCC TGGACGCTCC GATGACCACG ATCGCGCGGC GCGCGGGGGT CGGCGTCGCG ACGCTGTACC GGCGGTTCCC GACCAAGGGC GCGCTGGTGT CGGCGGCGTT CGCGGACACG CTCTGCGAGT GCGTCGAGCT GGTGGATCAC GCGTTGGAGC TACCCGATCC GTGGGACGGG TTCTGCTGGC TGCTGGAGCA GGTGTGCCTG AAGCAGGCCG AGGACCGGGG GTTCACGGCC GCGTTCCTGC GGATGTTCCC GGACGCCGTG GACGACGTGG CGCGGGACCG GGCGCTGGAG CGGTTCGCCG GGCTGGTCGA GCGGGCGAAG GCGGGCGGCA GGCTGCGGGC GGACTTCGAG CTGCACGACC TGACGATGGC GCTGATGGCC AACAGCGGTC TGGTGACCGA CAGCCGGGAG GCTGCCGAGG CGGCGACGCG GCGGCTGGTG GGCTACCTGA TCCAGGGGTT CGCGGCGCGC GATCCGCTGC CGCCCGCGAC GCCGCTGGGG TTGGAGCACG TGGTGCACTA CGGGAAGTGA
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Protein sequence | MDSQLPTAQA HVDEAPAALA PAEQAPAERL RADARDNRDR ILVTAREVFA SRGLDAPMTT IARRAGVGVA TLYRRFPTKG ALVSAAFADT LCECVELVDH ALELPDPWDG FCWLLEQVCL KQAEDRGFTA AFLRMFPDAV DDVARDRALE RFAGLVERAK AGGRLRADFE LHDLTMALMA NSGLVTDSRE AAEAATRRLV GYLIQGFAAR DPLPPATPLG LEHVVHYGK
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